RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CLDN19Q8N6F1 224 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 SMRP1Q8NCR6 262 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 RHBDD1Q8TEB9 315 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 NAT14Q8WUY8 206 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 EEF1AKMT1Q8WVE0 214 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 INPP5DQ92835 1189 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 FAM136AQ96C01 138 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 CCDC126Q96EE4 140 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 LINGO1Q96FE5 620 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 MAELQ96JY0 434 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 CNDP1Q96KN2 507 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 RIPOR3Q96MK2 946 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ACOX2Q99424 681 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 CCDC106Q9BWC9 280 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ILKAPQ9H0C8 392 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 WWP1Q9H0M0 922 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ABCG8Q9H221 673 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ZNF385DQ9H6B1 395 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 RUBCNLQ9H714 662 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 CYP4F12Q9HCS2 524 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 PRSS16Q9NQE7 514 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ARL8BQ9NVJ2 186 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 NCKIPSDQ9NZQ3 722 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 TRMT6Q9UJA5 497 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 GDF2Q9UK05 429 aaPredicted RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 CNOT6Q9ULM6 557 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 FNDC3AQ9Y2H6 1198 aaKnown RBP6.44□□□□□ -1.38
CAPN3-210ENST00000561817 ST14Q9Y5Y6 855 aa6.44□□□□□ -1.38
CAPN3-210ENST00000561817 NPEPPSL1A6NEC2 478 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 FADS2P1A8MWK0 482 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 TMEM233B4DJY2 109 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 H0Y858 1186 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 STX16-NPEPL1H3BU86 382 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 K7EQS6 105 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 PSMD11O00231 422 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 SDHDO14521 159 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 STX16O14662 325 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 HGSO14964 777 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 HDAC3O15379 428 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 MBTPS2O43462 519 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 SIX3O95343 332 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 CBX6O95503 412 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 SOD1P00441 154 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 PRNPP04156 253 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 SERPINA6P08185 405 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 RPS17P08708 135 aaKnown RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 TPBGLP0DKB5 382 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 MSX1P28360 303 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 GDI1P31150 447 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 ETV3P41162 512 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 GRIA2P42262 883 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 NSG1P42857 185 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 KIR2DL1P43626 348 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 LIG3P49916 1009 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 RPL14P50914 215 aaKnown RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 INHBCP55103 352 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 IL2P60568 153 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 ST8SIA6P61647 398 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 HERVK_113P63132 956 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 ELAVL3Q14576 367 aaKnown RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 MAP7D1Q3KQU3 841 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 ITPRIPL2Q3MIP1 535 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 UGT3A2Q3SY77 523 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 TMEM52BQ4KMG9 183 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 FNDC3BQ53EP0 1204 aaKnown RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 ACSBG2Q5FVE4 666 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 FAM219BQ5XKK7 198 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 XKR5Q6UX68 686 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 RPS27LQ71UM5 84 aaKnown RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 NRSN1Q8IZ57 195 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 PELI3Q8N2H9 469 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 TRAM1L1Q8N609 369 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 CCNYL1Q8N7R7 359 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 PTGR2Q8N8N7 351 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 GALNT6Q8NCL4 622 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 DDHD1Q8NEL9 900 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 STAG3L4Q8TBR4 150 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 PIP4K2CQ8TBX8 421 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 PPP4R1Q8TF05 950 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 ZNF483Q8TF39 744 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 OR8D1Q8WZ84 308 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 DLG3Q92796 817 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 SCAMP4Q969E2 229 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 UTP4Q969X6 686 aaKnown RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 COL26A1Q96A83 441 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 FAM131CQ96AQ9 280 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 ULK4Q96C45 1275 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 PHF21BQ96EK2 531 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 NECAB3Q96P71 396 aaPredicted RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 VPS35Q96QK1 796 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 OR52B2Q96RD2 323 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 TRMOQ9BU70 441 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 RIOK2Q9BVS4 552 aaKnown RBP6.43□□□□□ -1.38
CAPN3-210ENST00000561817 ERVK-6Q9BXR3 956 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 HDAC8Q9BY41 377 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 CLPBQ9H078 707 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 CCDC68Q9H2F9 335 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 LRMDAQ9H2I8 198 aa6.43□□□□□ -1.38
CAPN3-210ENST00000561817 FAM83DQ9H4H8 585 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms