RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 USP24Q9UPU5 2620 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 PIKFYVEQ9Y2I7 2098 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 TAF4O00268 1085 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 ITGB6P18564 788 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 PAMP19021 973 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 TTPAP49638 278 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 MRPS25P82663 173 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 C16orf72Q14CZ0 275 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 SYTL3Q4VX76 610 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 SNAP47Q5SQN1 464 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 KIAA0930Q6ICG6 404 aaPredicted RBP19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 NAPRTQ6XQN6 538 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 PCGF5Q86SE9 256 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 RBM12BQ8IXT5 1001 aaKnown RBP19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 KLHL3Q9UH77 587 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 RAXQ9Y2V3 346 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 RPS6KL1Q9Y6S9 549 aa19.48■□□□□ 0.71
TSPAN3-210ENST00000561277 ZZEF1O43149 2961 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 PLD2O14939 933 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 UBXN7O94888 489 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 AMD1P17707 334 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 IVDP26440 423 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 RBMS1P29558 406 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 LIMK2P53671 638 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 C2orf54Q08AI8 447 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 EIF3IQ13347 325 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 SQSTM1Q13501 440 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 BOP1Q14137 746 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 DHX34Q14147 1143 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 PLCL1Q15111 1095 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 ANKRD20A4Q4UJ75 823 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 ZNF658BQ4V348 819 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 MRNIPQ6NTE8 343 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 TMEM71Q6P5X7 295 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 ZNF449Q6P9G9 518 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 SPATA4Q8NEY3 305 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 FCRL3Q96P31 734 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 CMKLR1Q99788 373 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 DPYSL5Q9BPU6 564 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 EPB41L1Q9H4G0 881 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 PISDQ9UG56 409 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 PCDHGA8Q9Y5G5 932 aa19.47■□□□□ 0.71
TSPAN3-210ENST00000561277 APC2O95996 2303 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 FAM237BA0A1B0GVD1 139 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 MAGEB16A2A368 324 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 NDUFS3O75489 264 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 TNFSF15O95150 251 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 JMJD7P0C870 316 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 THRAP10827 490 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 PDHA2P29803 388 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 KRT33BQ14525 404 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 TBC1D25Q3MII6 688 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 ARMC3Q5W041 872 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 HOOK3Q86VS8 718 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 LSMEM2Q8N112 164 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 RSC1A1Q92681 617 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 PRR11Q96HE9 360 aaPredicted RBP19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 OR52A5Q9H2C5 316 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 OGFRQ9NZT2 677 aa19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 AKAP7Q9P0M2 348 aaPredicted RBP19.46■□□□□ 0.71
TSPAN3-210ENST00000561277 UBA6A0AVT1 1052 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 IQCF5A8MTL0 148 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 A8MU76 341 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 F8W8V4 182 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 IFRD1O00458 451 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 PRMT5O14744 637 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 TLX3O43711 291 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 BANF1O75531 89 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 GSTM1P09488 218 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 ITIH1P19827 911 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 ARCN1P48444 511 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 CSE1LP55060 971 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 GFERP55789 205 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 GSTM4Q03013 218 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 PTRHD1Q6GMV3 140 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 CAPRIN2Q6IMN6 1127 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 WDR74Q6RFH5 385 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 SDCCAG8Q86SQ7 713 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 LKAAEAR1Q8TD35 194 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 STAMBPL1Q96FJ0 436 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 SIGLEC10Q96LC7 697 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 ASCL3Q9NQ33 180 aa19.45■□□□□ 0.7
TSPAN3-210ENST00000561277 SRRM3A6NNA2 597 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 EFCAB8A8MWE9 144 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 LIN7AO14910 233 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 DXOO77932 396 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 EIF3BP55884 814 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 DHX9Q08211 1270 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 RPA4Q13156 261 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 MORF4L2Q15014 288 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 TMEM135Q86UB9 458 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 KRT222Q8N1A0 295 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 TRIM44Q96DX7 344 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 SNF8Q96H20 258 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 SLC46A1Q96NT5 459 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 DCBLD2Q96PD2 775 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 TGM7Q96PF1 710 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 TSSK1BQ9BXA7 367 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 THSD1Q9NS62 852 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms