RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 UBA6A0AVT1 1052 aaPredicted RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 PSTPIP1O43586 416 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 CST8O60676 142 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 SCRG1O75711 98 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 LPOP22079 712 aaPredicted RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 PBLDP30039 288 aaPredicted RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 AKT1P31749 480 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 UQCRFS1P47985 274 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 ARL4DP49703 201 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 PGDP52209 483 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 RPS15P62841 145 aaKnown RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 PDE1BQ01064 536 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 GPS2Q13227 327 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 XRCC4Q13426 336 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 GPR19Q15760 415 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 LONRF2Q1L5Z9 754 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 FNBP1LQ5T0N5 605 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 IZUMO3Q5VZ72 239 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 CAPRIN2Q6IMN6 1127 aaKnown RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 DUS1LQ6P1R4 473 aaKnown RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 SPOCD1Q6ZMY3 1216 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 TMEM126BQ8IUX1 230 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 ZNF567Q8N184 647 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 BEND7Q8N7W2 519 aaPredicted RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 IPMKQ8NFU5 416 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 OR2L2Q8NH16 312 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 ADAMTS17Q8TE56 1095 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 LRFN5Q96NI6 719 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 QKIQ96PU8 341 aaKnown RBP eCLIP12.77□□□□□ -0.371e-8■■■■■ 42
TPM1-220ENST00000559556 INSM2Q96T92 566 aaPredicted RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 CHP1Q99653 195 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 SLC25A23Q9BV35 468 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 WWP1Q9H0M0 922 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 ABHD10Q9NUJ1 306 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 ZNHIT6Q9NWK9 470 aaKnown RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 HRASLS2Q9NWW9 162 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 KLHL8Q9P2G9 620 aaPredicted RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 SLC24A2Q9UI40 661 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 ACSL5Q9ULC5 683 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.37
TPM1-220ENST00000559556 CFAP20Q9Y6A4 193 aaKnown RBP12.77□□□□□ -0.37
TPM1-220ENST00000559556 DCHS2Q6V1P9 2916 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 MGAT4DA6NG13 374 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 F5H423 210 aaPredicted RBP12.76□□□□□ -0.37
TPM1-220ENST00000559556 BUD23O43709 281 aaKnown RBP12.76□□□□□ -0.37
TPM1-220ENST00000559556 SPOPO43791 374 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 CEACAM4O75871 244 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 SORBS2O94875 1100 aaKnown RBP12.76□□□□□ -0.37
TPM1-220ENST00000559556 PRAMEF1O95521 474 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 SLC35G4P0C7Q5 338 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 PYGMP11217 842 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 TNNT1P13805 278 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 PTGIRP43119 386 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 KPNA2P52292 529 aaKnown RBP12.76□□□□□ -0.37
TPM1-220ENST00000559556 GSDMDP57764 484 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 ADCY2Q08462 1091 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 CHAF1BQ13112 559 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 BCL7AQ4VC05 210 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 TFDP3Q5H9I0 405 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 TMTC4Q5T4D3 741 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 CPT1CQ8TCG5 803 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 P3H4Q92791 437 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 MR1Q95460 341 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 LINC00615Q96LM1 132 aaPredicted RBP12.76□□□□□ -0.37
TPM1-220ENST00000559556 RMDN2Q96LZ7 410 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 C12orf66Q96MD2 445 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 ANP32EQ9BTT0 268 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 FSD1LQ9BXM9 530 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 NHEJ1Q9H9Q4 299 aaPredicted RBP12.76□□□□□ -0.37
TPM1-220ENST00000559556 LRRC4CQ9HCJ2 640 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 KCND1Q9NSA2 647 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 TRHDEQ9UKU6 1024 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 POMT2Q9UKY4 750 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 INTUQ9ULD6 942 aa12.76□□□□□ -0.37
TPM1-220ENST00000559556 FARSAQ9Y285 508 aaKnown RBP12.76□□□□□ -0.37
TPM1-220ENST00000559556 hCG_1818297A0A087WSY0 165 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 OR6C74A6NCV1 312 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 ARGFXA6NJG6 315 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 TTLL8A6PVC2 850 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 AGAP14A8MT82 685 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 HACD1B0YJ81 288 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 STX7O15400 261 aaKnown RBP12.75□□□□□ -0.37
TPM1-220ENST00000559556 SGTAO43765 313 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 MFAP3LO75121 409 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 VPS4BO75351 444 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 RAB40ALP0C0E4 278 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 MSL3P1P0C860 447 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 MSH3P20585 1137 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 COMTP21964 271 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 HADHBP55084 474 aaKnown RBP12.75□□□□□ -0.37
TPM1-220ENST00000559556 ABRQ12979 859 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 CACNA1CQ13936 2221 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 PTPRCAPQ14761 206 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 KAZNQ674X7 775 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 DET1Q7L5Y6 550 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 PID1Q7Z2X4 250 aa12.75□□□□□ -0.37
TPM1-220ENST00000559556 ZC3H18Q86VM9 953 aaKnown RBP12.75□□□□□ -0.37
TPM1-220ENST00000559556 LURAP1LQ8IV03 231 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms