RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RNF187Q5TA31 235 aaPredicted RBP19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 PTRHD1Q6GMV3 140 aaKnown RBP19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 CAPRIN2Q6IMN6 1127 aaKnown RBP19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 TMPRSS7Q7RTY8 843 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 SPRED1Q7Z699 444 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 ZNF761Q86XN6 746 aaPredicted RBP19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 ELMO1Q92556 727 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 CERS2Q96G23 380 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 LRRN3Q9H3W5 708 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 FBXO6Q9NRD1 293 aaPredicted RBP19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 FAM114A2Q9NRY5 505 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 INTS10Q9NVR2 710 aaKnown RBP19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC5A10A0PJK1 596 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 F8W8V4 182 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 NTN3O00634 580 aaPredicted RBP19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 PFDN6O15212 129 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 SPINK2P20155 84 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 ALDH4A1P30038 563 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 HALP42357 657 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 GPR3P46089 330 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 PREPP48147 710 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 CARSP49589 748 aaKnown RBP19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 ADARP55265 1226 aaKnown RBP19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 FRG1Q14331 258 aaKnown RBP19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 BRD3Q15059 726 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 DNTTIP2Q5QJE6 756 aaKnown RBP19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 TEDDM1Q5T9Z0 273 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 HES3Q5TGS1 186 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 CDCP2Q5VXM1 449 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 MARCH9Q86YJ5 346 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 PYROXD1Q8WU10 500 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 RMDN2Q96LZ7 410 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 FAM167BQ9BTA0 163 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 OR52A5Q9H2C5 316 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 MOCS1Q9NZB8 636 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 GNPTGQ9UJJ9 305 aa19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 CFAP20Q9Y6A4 193 aaKnown RBP19.85■□□□□ 0.77
TSPAN3-207ENST00000559494 LIN7AO14910 233 aaPredicted RBP19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 HAUS5O94927 633 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 MT-CO3P00414 261 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 VIPP01282 170 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 MPP1Q00013 466 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 RPA4Q13156 261 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 CCDC25Q86WR0 208 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 TMPRSS12Q86WS5 348 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 CNTN4Q8IWV2 1026 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 C2CD4AQ8NCU7 369 aaPredicted RBP19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 SH3KBP1Q96B97 665 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 CXorf40BQ96DE9 158 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 FOXP3Q9BZS1 431 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 PHACTR1Q9C0D0 580 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC40A1Q9NP59 571 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 PCDHB1Q9Y5F3 818 aa19.84■□□□□ 0.77
TSPAN3-207ENST00000559494 FAM149AA5PLN7 773 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 GPC4O75487 556 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 ESR1P03372 595 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 RPLP0P05388 317 aaKnown RBP19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC35G4P0C7Q5 338 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 PKMP14618 531 aaKnown RBP19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 AOAHP28039 575 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 GABRB3P28472 473 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 MAGEA4P43358 317 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 LEPRP48357 1165 aaKnown RBP19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 ZNF549Q6P9A3 640 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 CNSTQ6PJW8 725 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 TRIM48Q8IWZ4 208 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 PALM2Q8IXS6 379 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 GALNT15Q8N3T1 639 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 AVL9Q8NBF6 648 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 GSDMBQ8TAX9 411 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 IFT81Q8WYA0 676 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 C12orf66Q96MD2 445 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC38A3Q99624 504 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 SCNM1Q9BWG6 230 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC17A6Q9P2U8 582 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 GALPQ9UBC7 116 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 KLK13Q9UKR3 277 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 CDYLQ9Y232 598 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 VPS9D1Q9Y2B5 631 aa19.83■□□□□ 0.77
TSPAN3-207ENST00000559494 IGHV1OR21-1A0A087WYE8 117 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 FAM221BA6H8Z2 402 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 NIPSNAP2O75323 286 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 AHSGP02765 367 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 MTHFD1P11586 935 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 JUPP14923 745 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 CD1CP29017 333 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 SSTR1P30872 391 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 CD151P48509 253 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 CSE1LP55060 971 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 GPX6P59796 221 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 BOP1Q14137 746 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 AMZ1Q400G9 498 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 NKAIN2Q5VXU1 208 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 DUS1LQ6P1R4 473 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 ZNF449Q6P9G9 518 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 CAPN12Q6ZSI9 719 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 TMEM26Q6ZUK4 368 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 USP53Q70EK8 1073 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 VRK3Q8IV63 474 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 CACTIN-AS1Q8N1I8 211 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms