RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 MOSPD3O75425 235 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 MED24O75448 989 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 B3GALNT1O75752 331 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 BCAR3O75815 825 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SERPINI2O75830 405 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 LUC7L3O95232 432 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PGLSO95336 258 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ZFYP08048 801 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 INHBAP08476 426 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 KRT19P08727 400 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 RAB40ALP0C0E4 278 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 OR2T7P0C7T2 308 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ADRA2CP18825 462 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 GNAZP19086 355 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 CYP11B2P19099 503 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ITIH1P19827 911 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 GNLYP22749 145 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PROZP22891 400 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 KELP23276 732 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ACAT1P24752 427 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PSMA3P25788 255 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 CTNNB1P35222 781 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 GNL1P36915 607 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 APOBEC1P41238 236 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 MMP13P45452 471 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 COMPP49747 757 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 CLK1P49759 484 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 NT5C2P49902 561 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ASCL1P50553 236 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 RASSF2P50749 326 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 NUDT6P53370 316 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 CTSCP53634 463 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SNU13P55769 128 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 HNRNPH2P55795 449 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PROK1P58294 105 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SEC61BP60468 96 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 STX1BP61266 288 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ST8SIA6P61647 398 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ARF5P84085 180 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 C17orf67Q0P5P2 114 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 DAZAP2Q15038 168 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SRSF7Q16629 238 aaKnown RBP eCLIP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 UGCGQ16739 394 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 MEP1BQ16820 701 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 AMZ1Q400G9 498 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 IFI44LQ53G44 452 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 FNBP1LQ5T0N5 605 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 GCNT6Q5T4J0 391 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PXDC1Q5TGL8 231 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ASPHD1Q5U4P2 390 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 C18orf63Q68DL7 685 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ETFRF1Q6IPR1 90 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 MFSD12Q6NUT3 480 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 CRIP3Q6Q6R5 217 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 TMEM270Q6UE05 265 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 TMEM182Q6ZP80 229 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 LINC00696Q6ZRV3 163 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 FAM43BQ6ZT52 329 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ZNF534Q76KX8 674 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 KCTD9Q7L273 389 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 MEPCEQ7L2J0 689 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 DSG4Q86SJ6 1040 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PHLDB2Q86SQ0 1253 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 LDLRAD3Q86YD5 345 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PEX5LQ8IYB4 626 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 MAML2Q8IZL2 1156 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 GCSAMQ8N6F7 178 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 NANOGP1Q8N7R0 232 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 UXS1Q8NBZ7 420 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 OR7G3Q8NG95 312 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 OR14A16Q8NHC5 309 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SPATA20Q8TB22 786 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ST7LQ8TDW4 575 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 DENND1AQ8TEH3 1009 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SLC38A5Q8WUX1 472 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 UBLCP1Q8WVY7 318 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SLC44A1Q8WWI5 657 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 RSPH1Q8WYR4 309 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 WASF1Q92558 559 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 NSMAFQ92636 917 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 DPF1Q92782 380 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 INPP5DQ92835 1189 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SEMA4DQ92854 862 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 MIB2Q96AX9 1013 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 MOB3AQ96BX8 217 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 RHBDF1Q96CC6 855 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ZNF582Q96NG8 517 aaPredicted RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 RUNDC3BQ96NL0 473 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PRAM1Q96QH2 718 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 OR1F2PQ96R84 312 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 CPNE1Q99829 537 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SLX1AQ9BQ83 275 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 C16orf70Q9BSU1 422 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 LMF2Q9BU23 707 aaKnown RBP2.24□□□□□ -2.05
GABPB1-209ENST00000559100 CACNG6Q9BXT2 260 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 SEMA4CQ9C0C4 833 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 PRSS22Q9GZN4 317 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 ABCG8Q9H221 673 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 LRMDAQ9H2I8 198 aa2.24□□□□□ -2.05
GABPB1-209ENST00000559100 FZD8Q9H461 694 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms