RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 XRCC1P18887 633 aaPredicted RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 AOAHP28039 575 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 ACADLP28330 430 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 SSTR1P30872 391 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 CARSP49589 748 aaKnown RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 TTPAP49638 278 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 PGGT1BP53609 377 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 ADARP55265 1226 aaKnown RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 EIF3BP55884 814 aaKnown RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 OR1D5P58170 312 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 FOXC1Q12948 553 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 CALCOCO2Q13137 446 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 CAMK2BQ13554 666 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 AARS2Q5JTZ9 985 aaKnown RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 TEDDM1Q5T9Z0 273 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 HES3Q5TGS1 186 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 TMPRSS7Q7RTY8 843 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 B3GNT8Q7Z7M8 397 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 CCNJLQ8IV13 435 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 CFAP206Q8IYR0 622 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 CEP112Q8N8E3 955 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 Q8N9G6 341 aaPredicted RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 MNS1Q8NEH6 495 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 ACVR1CQ8NER5 493 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 MAPK15Q8TD08 544 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 JPH3Q8WXH2 748 aaPredicted RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 NAT6Q93015 286 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 C9orf72Q96LT7 481 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 TBC1D10AQ9BXI6 508 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 PHACTR1Q9C0D0 580 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 SLC40A1Q9NP59 571 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 NCKIPSDQ9NZQ3 722 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 TMEM9Q9P0T7 183 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 FBXO5Q9UKT4 447 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 ATXN7L1Q9ULK2 861 aaPredicted RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 APOBEC2Q9Y235 224 aaKnown RBP11.19□□□□□ -0.62
SNX1-204ENST00000559061 CRYL1Q9Y2S2 319 aa11.19□□□□□ -0.62
SNX1-204ENST00000559061 IGHV1OR21-1A0A087WYE8 117 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 KIR2DS5A0A0G2JLQ3 304 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 A0A0G2JNG1 304 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 FAM221BA6H8Z2 402 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 PDZK1P1A8MUH7 402 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 KIR2DS3K7RE56 304 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 EIF3HO15372 352 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNX1-204ENST00000559061 TTC4O95801 387 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 RPLP0P05388 317 aaKnown RBP11.18□□□□□ -0.62
SNX1-204ENST00000559061 MYBL2P10244 700 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 MTHFD1P11586 935 aaKnown RBP11.18□□□□□ -0.62
SNX1-204ENST00000559061 PAMP19021 973 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 IDSP22304 550 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 CD1CP29017 333 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 FMO4P31512 558 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 LEPRP48357 1165 aaKnown RBP11.18□□□□□ -0.62
SNX1-204ENST00000559061 CLCN7P51798 805 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 HHEXQ03014 270 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 KIR2DS5Q14953 304 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 GLE1Q53GS7 698 aaKnown RBP11.18□□□□□ -0.62
SNX1-204ENST00000559061 RBM20Q5T481 1227 aaKnown RBP11.18□□□□□ -0.62
SNX1-204ENST00000559061 NKAIN2Q5VXU1 208 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 MRNIPQ6NTE8 343 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 ZNF574Q6ZN55 896 aaPredicted RBP11.18□□□□□ -0.62
SNX1-204ENST00000559061 CAPN12Q6ZSI9 719 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 ERMP1Q7Z2K6 904 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 DCBLD1Q8N8Z6 715 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 ELMO1Q92556 727 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNX1-204ENST00000559061 FAM136AQ96C01 138 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 TCF12Q99081 682 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 NUDT22Q9BRQ3 303 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 NAT9Q9BTE0 207 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 TWSG1Q9GZX9 223 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 LRRC4CQ9HCJ2 640 aa11.18□□□□□ -0.62
SNX1-204ENST00000559061 INTS10Q9NVR2 710 aaKnown RBP11.18□□□□□ -0.62
SNX1-204ENST00000559061 TCRBV9S1A1TA0A576 114 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 UBA6A0AVT1 1052 aaPredicted RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 KRT87PA6NCN2 255 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 D6RAR5 112 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 NDUFS3O75489 264 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 SLCO2B1O94956 709 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 TRIM16O95361 564 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 AHSGP02765 367 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 FTH1P02794 183 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 RHOXF2BP0C7M4 288 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 OR56A5P0C7T3 313 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 RPIAP49247 311 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 DUSP3P51452 185 aaPredicted RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 CSE1LP55060 971 aaKnown RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 CDKN2DP55273 166 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 PPP1CAP62136 330 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 SHC2P98077 582 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 CAV1Q03135 178 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 BOP1Q14137 746 aaKnown RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 GPR18Q14330 331 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 EFTUD2Q15029 972 aaKnown RBP eCLIP11.17□□□□□ -0.627e-14■■■■■ 31
SNX1-204ENST00000559061 BRD3Q15059 726 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 RNF187Q5TA31 235 aaPredicted RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 TMEM26Q6ZUK4 368 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 GALNT7Q86SF2 657 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 PDZD3Q86UT5 571 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms