RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SCML4Q8N228 414 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TSNAXQ99598 290 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 WASH6PQ9NQA3 447 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 SMOXQ9NWM0 555 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 NARFQ9UHQ1 456 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 LY86O95711 162 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 PLA2G16P53816 162 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CSTF1Q05048 431 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CMPK2Q5EBM0 449 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 C1QTNF12Q5T7M4 302 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 IDO2Q6ZQW0 420 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CPSF7Q8N684 471 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 MROH8Q9H579 483 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CDH7Q9ULB5 785 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TMEM5Q9Y2B1 443 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 RPS2P15880 293 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 FMO1Q01740 532 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ACSM2AQ08AH3 577 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ACOX1Q15067 660 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ACSM2BQ68CK6 577 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF627Q7L945 461 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CGREF1Q99674 301 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GON7Q9BXV9 100 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CCDC86Q9H6F5 360 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 NECTIN3Q9NQS3 549 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 RFX7Q2KHR2 1363 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 LRRC9Q6ZRR7 1453 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 HLA-DPB1P04440 258 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 RETP07949 1114 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 MAGEA12P43365 314 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CDADC1Q9BWV3 514 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 LHX5Q9H2C1 402 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 MARK1Q9P0L2 795 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 KCNN3Q9UGI6 736 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 NUMA1Q14980 2115 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 J3QLW9 94 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 AGPAT2O15120 278 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF19P17023 458 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 POU6F2P78424 691 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 PLA2G7Q13093 441 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GPR19Q15760 415 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 FBXO48Q5FWF7 155 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GNASQ5JWF2 1037 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 PDSS1Q5T2R2 415 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 HECTD2Q5U5R9 776 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 DENND6BQ8NEG7 585 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 KLHL5Q96PQ7 755 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TXLNGYQ9BZA5 131 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 IPPKQ9H8X2 491 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 NIT2Q9NQR4 276 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF69Q9UC07 566 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 LOC730098B7Z3J9 87 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CBX4O00257 560 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 KCNA6P17658 529 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 KLRC2P26717 231 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GINS1Q14691 196 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 NTRK2Q16620 822 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF767PQ75MW2 155 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ANKRD46Q86W74 232 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF557Q8N988 423 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ADAMTS16Q8TE57 1224 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ALPK1Q96QP1 1244 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 C2orf49Q9BVC5 232 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GTPBP1O00178 669 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 RASAL1O95294 804 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 HLA-DQA2P01906 255 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 BUD31P41223 144 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 RAB5BP61020 215 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TSPAN5P62079 268 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GBE1Q04446 702 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 POU4F2Q12837 409 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 FAM217AQ8IXS0 508 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TOMM5Q8N4H5 51 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 C7orf43Q8WVR3 580 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 COL20A1Q9P218 1284 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TTLL8A6PVC2 850 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 EEF1E1O43324 174 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 SRSF11Q05519 484 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CYP1B1Q16678 543 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 DCAF15Q66K64 600 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 AP2M1Q96CW1 435 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 RPL10LQ96L21 214 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GLOD4Q9HC38 313 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 PRDM8Q9NQV8 689 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 GNG8Q9UK08 70 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 PRAMEF33A0A0G2JMD5 474 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 CAPN14A8MX76 684 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 FAM47E-STBD1D6RA91 191 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 PRAMEF10O60809 474 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF7P17097 686 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 NMBRP28336 390 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 TARDBPQ13148 414 aaKnown RBP eCLIP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 XKR6Q5GH73 641 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 DOK6Q6PKX4 331 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 ANKRD53Q8N9V6 530 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 OR6C4Q8NGE1 309 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 NECTIN4Q96NY8 510 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 BTG4Q9NY30 223 aa3.64□□□□□ -1.83
ATXN3-248ENST00000558190 SORBS2O94875 1100 aaKnown RBP3.64□□□□□ -1.83
ATXN3-248ENST00000558190 FXNQ16595 210 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms