RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MMP15P51511 669 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 DSCR10P59022 87 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 TAS2R40P59535 323 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 RPL7AP62424 266 aaKnown RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 CEBPZQ03701 1054 aaKnown RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 CSTF3Q12996 717 aaKnown RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 SOWAHCQ53LP3 525 aaPredicted RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 LRIF1Q5T3J3 769 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 NDUFAF5Q5TEU4 345 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 ACAD10Q6JQN1 1059 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 SEPT14Q6ZU15 432 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 HEATR4Q86WZ0 1026 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 ZNF354CQ86Y25 554 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 PTOV1Q86YD1 416 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 C1orf52Q8N6N3 182 aaKnown RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 METTL6Q8TCB7 284 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 SEPT5Q99719 369 aaPredicted RBP3.76□□□□□ -1.81
VRK1-207ENST00000557352 MTMR10Q9NXD2 777 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 BARHL2Q9NY43 387 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 TMEM181Q9P2C4 612 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 FBXW11Q9UKB1 542 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 SCAPERQ9BY12 1400 aa3.76□□□□□ -1.81
VRK1-207ENST00000557352 EFCAB6Q5THR3 1501 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 RPRD2Q5VT52 1461 aaKnown RBP3.75□□□□□ -1.81
VRK1-207ENST00000557352 PIK3C2BO00750 1634 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 LAMC1P11047 1609 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 CAMSAP1Q5T5Y3 1602 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 TEX13DA0A0J9YY54 714 aaPredicted RBP3.75□□□□□ -1.81
VRK1-207ENST00000557352 MEIOCA2RUB1 952 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 PLPP2O43688 288 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 SORBS2O94875 1100 aaKnown RBP3.75□□□□□ -1.81
VRK1-207ENST00000557352 IPO7O95373 1038 aaKnown RBP3.75□□□□□ -1.81
VRK1-207ENST00000557352 NADKO95544 446 aaPredicted RBP3.75□□□□□ -1.81
VRK1-207ENST00000557352 CLPTM1O96005 669 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 DPEP1P16444 411 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 HRH2P25021 359 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 ITGA3P26006 1051 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 CD81P60033 236 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 ADIPOQQ15848 244 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 FAAP20Q6NZ36 180 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 ZNF440Q8IYI8 595 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 TMEM116Q8NCL8 245 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 ZUFSPQ96AP4 578 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 RRP36Q96EU6 259 aaKnown RBP3.75□□□□□ -1.81
VRK1-207ENST00000557352 RHNO1Q9BSD3 238 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 EPB41L5Q9HCM4 733 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 B3GALT5Q9Y2C3 310 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 ANKRD30BQ9BXX2 1392 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 TRPM2O94759 1503 aa3.75□□□□□ -1.81
VRK1-207ENST00000557352 A2MP01023 1474 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 PPLO60437 1756 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 H7C423 109 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 MAP2K7O14733 419 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 DAB1O75553 588 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 EML2O95834 649 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 PBX3P40426 434 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 ADAMTSL4-AS1Q5T5F5 129 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 CCDC190Q86UF4 302 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 RNF168Q8IYW5 571 aaPredicted RBP3.74□□□□□ -1.81
VRK1-207ENST00000557352 TSPYL6Q8N831 410 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 OR2T12Q8NG77 320 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 OR8K5Q8NH50 307 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 SMPDL3BQ92485 455 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 GFI1Q99684 422 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 ZNF71Q9NQZ8 489 aaPredicted RBP3.74□□□□□ -1.81
VRK1-207ENST00000557352 RCC2Q9P258 522 aaKnown RBP3.74□□□□□ -1.81
VRK1-207ENST00000557352 R3HDM2Q9Y2K5 976 aaKnown RBP3.74□□□□□ -1.81
VRK1-207ENST00000557352 MYO5BQ9ULV0 1848 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 PREX1Q8TCU6 1659 aa3.74□□□□□ -1.81
VRK1-207ENST00000557352 DHX29Q7Z478 1369 aaKnown RBP3.74□□□□□ -1.81
VRK1-207ENST00000557352 SPAG9O60271 1321 aaKnown RBP3.73□□□□□ -1.81
VRK1-207ENST00000557352 ARID4BQ4LE39 1312 aaPredicted RBP3.73□□□□□ -1.81
VRK1-207ENST00000557352 SIGLEC1Q9BZZ2 1709 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 PTPRTO14522 1441 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 ZNF217O75362 1048 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 SELLP14151 372 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 ANXA7P20073 488 aaKnown RBP3.73□□□□□ -1.81
VRK1-207ENST00000557352 EPHA2P29317 976 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 BMXP51813 675 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 IRX6P78412 446 aaPredicted RBP3.73□□□□□ -1.81
VRK1-207ENST00000557352 KCNJ10P78508 379 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 MRPS5P82675 430 aaKnown RBP3.73□□□□□ -1.81
VRK1-207ENST00000557352 BHLHB9Q6PI77 547 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 TSPAN33Q86UF1 283 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 CPXCR1Q8N123 301 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 PPHLN1Q8NEY8 458 aaKnown RBP3.73□□□□□ -1.81
VRK1-207ENST00000557352 SGCDQ92629 289 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 MOCOSQ96EN8 888 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 GMPPAQ96IJ6 420 aaPredicted RBP3.73□□□□□ -1.81
VRK1-207ENST00000557352 VGLL1Q99990 258 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 RTP3Q9BQQ7 232 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 POLR1BQ9H9Y6 1135 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 PELI2Q9HAT8 420 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 ECHDC1Q9NTX5 307 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 ATAD3AQ9NVI7 634 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 TRPM1Q7Z4N2 1603 aa3.73□□□□□ -1.81
VRK1-207ENST00000557352 ARHGAP31Q2M1Z3 1444 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 ABCC3O15438 1527 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 OR2M5A3KFT3 312 aa3.72□□□□□ -1.81
VRK1-207ENST00000557352 H3BQ06 376 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms