RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 GKN2Q86XP6 184 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 HID1Q8IV36 788 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 PNPLA1Q8N8W4 532 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 FBXO15Q8NCQ5 510 aaPredicted RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 OR2W6PQ8NHA6 318 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 LKAAEAR1Q8TD35 194 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 ELMO1Q92556 727 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 TSACCQ96A04 125 aaPredicted RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 TMEM159Q96B96 161 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 ALKBH8Q96BT7 664 aaKnown RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 NDNQ99608 321 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 GPR21Q99679 349 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 LRRC61Q9BV99 259 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 DERL2Q9GZP9 239 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 OR52A5Q9H2C5 316 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 ARRDC1-AS1Q9H2J1 176 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 SSU72Q9NP77 194 aaKnown RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 MRPL40Q9NQ50 206 aaKnown RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 SNX15Q9NRS6 342 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 DNAAF2Q9NVR5 837 aaKnown RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 DNAJC28Q9NX36 388 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 KLF15Q9UIH9 416 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 SLC39A10Q9ULF5 831 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 PCYT1BQ9Y5K3 369 aaPredicted RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 SNX11Q9Y5W9 270 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 CACNA1AO00555 2505 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 CFAP54Q96N23 3096 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 NEMP2A6NFY4 417 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 GOLGA6L10A6NI86 522 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 AGPSO00116 658 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 SLC16A5O15375 505 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 AQP9O43315 295 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 OPA1O60313 960 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 RFPL1O75677 317 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 TRIM16O95361 564 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 MATN4O95460 622 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 TSPAN12O95859 305 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 MYZAPP0CAP1 466 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 SLC35E2BP0CK96 405 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CTSEP14091 401 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 IDSP22304 550 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 EPHA8P29322 1005 aaPredicted RBP11.04□□□□□ -0.64
FOXN3-212ENST00000556541 TYK2P29597 1187 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CCT8P50990 548 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 IL2P60568 153 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 ATP6V0D1P61421 351 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CTBSQ01459 385 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 SLC18A2Q05940 514 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 SLC14A1Q13336 389 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 SP140Q13342 867 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 SHBQ15464 509 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 SMAD1Q15797 465 aaKnown RBP11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CSRP2Q16527 193 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 TSNAXIP1Q2TAA8 658 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 UAP1L1Q3KQV9 507 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 TAF1BQ53T94 588 aaPredicted RBP11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CEP85LQ5SZL2 805 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 MROH9Q5TGP6 573 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 AGBL2Q5U5Z8 902 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 KCTD16Q68DU8 428 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CAPRIN2Q6IMN6 1127 aaKnown RBP11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CRTC3Q6UUV7 619 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 UNC5DQ6UXZ4 953 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 DBX2Q6ZNG2 339 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CLEC14AQ86T13 490 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 PDZD3Q86UT5 571 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 C17orf82Q86X59 251 aaPredicted RBP11.04□□□□□ -0.64
FOXN3-212ENST00000556541 NRROSQ86YC3 692 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 CEP97Q8IW35 865 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 KRT222Q8N1A0 295 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 ZNF548Q8NEK5 533 aaPredicted RBP11.04□□□□□ -0.64
FOXN3-212ENST00000556541 ACVR1CQ8NER5 493 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 GIMAP7Q8NHV1 300 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 ZFPM2Q8WW38 1151 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 TMEM168Q9H0V1 697 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 TMBIM4Q9HC24 238 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 SLC23A2Q9UGH3 650 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 NOVA2Q9UNW9 492 aaKnown RBP11.04□□□□□ -0.64
FOXN3-212ENST00000556541 ACOT9Q9Y305 439 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 HEBP2Q9Y5Z4 205 aa11.04□□□□□ -0.64
FOXN3-212ENST00000556541 ARID1BQ8NFD5 2236 aaPredicted RBP11.04□□□□□ -0.64
FOXN3-212ENST00000556541 KIR2DS5A0A0G2JLQ3 304 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 A0A0G2JNG1 304 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 IQCF5A8MTL0 148 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 KIR2DS3K7RE56 304 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 SCAMP1O15126 338 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 RGS16O15492 202 aaPredicted RBP11.03□□□□□ -0.64
FOXN3-212ENST00000556541 CFIP05156 583 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 C2P06681 752 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 ACP5P13686 325 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 F3P13726 295 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 ACADLP28330 430 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 NDUFS1P28331 727 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 KPNA2P52292 529 aaKnown RBP11.03□□□□□ -0.64
FOXN3-212ENST00000556541 SLC18A1P54219 525 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 BMPR2Q13873 1038 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 KIR2DS5Q14953 304 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 HLA-BQ31612 363 aa11.03□□□□□ -0.64
FOXN3-212ENST00000556541 SYTL3Q4VX76 610 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms