RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PDCD6IPQ8WUM4 868 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 IGSF8Q969P0 613 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 REXO5Q96IC2 774 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 REPIN1Q9BWE0 567 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 C1QTNF1Q9BXJ1 281 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 KIAA1671Q9BY89 1806 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CATSPERBQ9H7T0 1116 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SAR1AQ9NR31 198 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 KCNK4Q9NYG8 393 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ARMCX1Q9P291 453 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SLC2A6Q9UGQ3 507 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 PSME2Q9UL46 239 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SLC27A5Q9Y2P5 690 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 WBP11Q9Y2W2 641 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 HCN4Q9Y3Q4 1203 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 PCDHGA10Q9Y5H3 936 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 A0A1B0GWJ7 208 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 NT5C1B-RDH14C9J2C7 533 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 HSBP1L1C9JCN9 74 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 G3V2L1 256 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 J3KR12 359 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SCAMP2O15127 329 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CLN5O75503 358 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 UBTFL6P0CB48 400 aaPredicted RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 KITP10721 976 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CPB1P15086 417 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TYK2P29597 1187 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 P2RX3P56373 397 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 RAB15P59190 212 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 MPP1Q00013 466 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ALDH6A1Q02252 535 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 GRSF1Q12849 480 aaKnown RBP eCLIP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CHAF1BQ13112 559 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 POU6F1Q14863 301 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SPCS2Q15005 226 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CTXN3Q4LDR2 81 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ATG16L1Q676U5 607 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 NAPRTQ6XQN6 538 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ZC3HC1Q86WB0 502 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SPNS2Q8IVW8 549 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 DENND6AQ8IWF6 608 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 DCP1BQ8IZD4 617 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CAMKK1Q8N5S9 505 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 LPCAT1Q8NF37 534 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 GPR22Q99680 433 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 OLFM1Q99784 485 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TBL1YQ9BQ87 522 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 PSD2Q9BQI7 771 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 UNKQ9C0B0 810 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ATXN3LQ9H3M9 355 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 FBXO44Q9H4M3 255 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TRIM39Q9HCM9 518 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TREX1Q9NSU2 369 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TMEM248Q9NWD8 314 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CPNE7Q9UBL6 633 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 DCDC2Q9UHG0 476 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 RUVBL1Q9Y265 456 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 AAR2Q9Y312 384 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 PCDHB5Q9Y5E4 795 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TRBV23OR9-2A0A075B6M9 112 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 FCHO1O14526 889 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TADA2AO75478 443 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 GJB3O75712 270 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 AHSGP02765 367 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 C2P06681 752 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ZDHHC11BP0C7U3 371 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 PTBP1P26599 531 aaKnown RBP eCLIP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SLC15A1P46059 708 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 HK2P52789 917 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 AQP5P55064 265 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SLC10A7Q0GE19 358 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 C17orf67Q0P5P2 114 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 EFEMP1Q12805 493 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 DUSP4Q13115 394 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 PIN1Q13526 163 aaPredicted RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 GRM3Q14832 879 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 FAM76BQ5HYJ3 339 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TCTE1Q5JU00 501 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 FAM205BPQ63HN1 556 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 NADSYN1Q6IA69 706 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ESRP1Q6NXG1 681 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 FBXL22Q6P050 247 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 FUT10Q6P4F1 479 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 KLHL35Q6PF15 583 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 PAPD4Q6PIY7 484 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 IDO2Q6ZQW0 420 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 LINC00523Q86TU6 105 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 RALGPS2Q86X27 583 aaPredicted RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CCDC117Q8IWD4 279 aaPredicted RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 SLC43A2Q8N370 569 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 FAM13CQ8NE31 585 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 FBXO27Q8NI29 283 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 PNPT1Q8TCS8 783 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 EME1Q96AY2 570 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 HMCESQ96FZ2 354 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ZDHHC12Q96GR4 267 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 ZNF285Q96NJ3 590 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 CADM1Q9BY67 442 aaKnown RBP5.03□□□□□ -1.6
TMEM260-210ENST00000556422 TIMMDC1Q9NPL8 285 aa5.03□□□□□ -1.6
TMEM260-210ENST00000556422 RBM22Q9NW64 420 aaKnown RBP eCLIP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms