RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CLDN11O75508 207 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 ITPKAP23677 461 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 BCAP31P51572 246 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 GHRHRQ02643 423 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 C11orf91Q3C1V1 193 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 CERS6Q6ZMG9 384 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 PLEKHM3Q6ZWE6 761 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 OMA1Q96E52 524 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 MYO19Q96H55 970 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 ATP13A3Q9H7F0 1226 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 LSM1O15116 133 aaKnown RBP14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 TRBC1P01850 177 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 CD36P16671 472 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 PPIBP23284 216 aaKnown RBP14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 MAPKAPK2P49137 400 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 MAP2K5Q13163 448 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 TAF1AQ15573 450 aaPredicted RBP14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 SPATS1Q496A3 300 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 ZFYVE1Q9HBF4 777 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 UBAP1Q9NZ09 502 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 GSTK1Q9Y2Q3 226 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 LOC100130705A0A1B0GUX0 176 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 PIPSLA2A3N6 862 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 TNFRSF21O75509 655 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 CDK4P11802 303 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 KCNE1P15382 129 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 GRK3P35626 688 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 ADAM17P78536 824 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 ATP6AP1Q15904 470 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 PYDC2Q56P42 97 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 EPHX4Q8IUS5 362 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 SLC2A13Q96QE2 648 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 AARSD1Q9BTE6 412 aaKnown RBP14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 C1orf109Q9NX04 203 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 TOR4AQ9NXH8 423 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 ANGPT4Q9Y264 503 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 PTGDR2Q9Y5Y4 395 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 HS3ST4Q9Y661 456 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 SLC6A2P23975 617 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 PTGER3P43115 390 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 GJA8P48165 433 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 TMBIM6P55061 237 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 LINGO4Q6UY18 593 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 RBM12BQ8IXT5 1001 aaKnown RBP14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 KBTBD7Q8WVZ9 684 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 ZDHHC6Q9H6R6 413 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 SMURF2Q9HAU4 748 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 RIMS3Q9UJD0 308 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 TNFRSF11BO00300 401 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 TFAP2AP05549 437 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 VARSP26640 1264 aaKnown RBP14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 QPRTQ15274 297 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 ZFP69Q49AA0 526 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 NPWQ8N729 165 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 COPS4Q9BT78 406 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.047e-7■■■□□ 16.3
ARHGEF40-207ENST00000556399 CRTAC1Q9NQ79 661 aa14.82□□□□□ -0.04
ARHGEF40-207ENST00000556399 DDX60LQ5H9U9 1706 aaKnown RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 TCAF2A6NFQ2 919 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 PRAMEF1O95521 474 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 RPS14P62263 151 aaKnown RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 HMGCS1Q01581 520 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 TAB1Q15750 504 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 CPTPQ5TA50 214 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 NANOGP8Q6NSW7 305 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 DOK6Q6PKX4 331 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 HACD2Q6Y1H2 254 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 TPGS1Q6ZTW0 290 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 SMG8Q8ND04 991 aaKnown RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 OR4A15Q8NGL6 344 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 OR52J3Q8NH60 311 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 ATL1Q8WXF7 558 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 AURKBQ96GD4 344 aaPredicted RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 NSUN5Q96P11 429 aaKnown RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 ANKRD60Q9BZ19 345 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 TPK1Q9H3S4 243 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 NANOGQ9H9S0 305 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 TXNRD2Q9NNW7 524 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 PHLPP1O60346 1717 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 PLK4O00444 970 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 PFKMP08237 780 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 MAPK8P45983 427 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 ANXA8L1Q5VT79 327 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 MZT2BQ6NZ67 158 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 WDR36Q8NI36 951 aaKnown RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 MAGEB10Q96LZ2 347 aaPredicted RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 MAGEH1Q9H213 219 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 SERHL2Q9H4I8 314 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 SERHLQ9NQF3 203 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 POLR3BQ9NW08 1133 aaPredicted RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 SSR3Q9UNL2 185 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 CDK14O94921 469 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 C8BP07358 591 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 G6PDP11413 515 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 EPORP19235 508 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 PRKACGP22612 351 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 LEPRP48357 1165 aaKnown RBP14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 C1QTNF8P60827 252 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 TRNP1Q6NT89 227 aa14.81□□□□□ -0.04
ARHGEF40-207ENST00000556399 DLK2Q6UY11 383 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms