RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 NT5EP21589 574 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 CCT3P49368 545 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 CHIT1Q13231 466 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ATP1A4Q13733 1029 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 GRB14Q14449 540 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SNAPC1Q16533 368 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ADGRF1Q5T601 910 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 FAM91A1Q658Y4 838 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 CRTC3Q6UUV7 619 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 LAPTM4BQ86VI4 370 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 POC5Q8NA72 575 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 PNPLA2Q96AD5 504 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 FKBP10Q96AY3 582 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 PPP1R14BQ96C90 147 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SLC38A3Q99624 504 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 GRIP2Q9C0E4 1043 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 POPDC3Q9HBV1 291 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 MKKSQ9NPJ1 570 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SPATA7Q9P0W8 599 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 EVLQ9UI08 416 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 IGLV3-22A0A075B6J6 115 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 PDPK1O15530 556 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 AP5Z1O43299 807 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 PAPSS2O95340 614 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SAGP10523 405 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 CCKBRP32239 447 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ALDH3A2P51648 485 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 FOLH1Q04609 750 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SCN1BQ07699 218 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SNTA1Q13424 505 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SUZ12Q15022 739 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ZBTB6Q15916 424 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 NRF1Q16656 503 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 LLGL2Q6P1M3 1020 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 C12orf29Q8N999 325 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 OR4C6Q8NH72 309 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 OR14C36Q8NHC7 312 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 MCFD2Q8NI22 146 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SUN3Q8TAQ9 357 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 DNASE1L2Q92874 299 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 MOAP1Q96BY2 351 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SEMA6AQ9H2E6 1030 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 PIH1D1Q9NWS0 290 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 CNTN3Q9P232 1028 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 RPL36Q9Y3U8 105 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ARL5CA6NH57 179 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 BCKDKO14874 412 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 WNT9AO14904 365 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 KCNE1P15382 129 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 KCNA5P22460 613 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 PSMD8P48556 350 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 RPS14P62263 151 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ERVK-8P63133 956 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SWT1Q5T5J6 900 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 IL23RQ5VWK5 629 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ADNP2Q6IQ32 1131 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SERPINA9Q86WD7 417 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 CELF5Q8N6W0 485 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 TP53INP1Q96A56 240 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 BCL2L14Q9BZR8 327 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SRMSQ9H3Y6 488 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 NOL6Q9H6R4 1146 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 MRM3Q9HC36 420 aaKnown RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 C19orf25Q9UFG5 118 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF451Q9Y4E5 1061 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 NPEPPSL1A6NEC2 478 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 NPC1O15118 1278 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 GSC2O15499 205 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 PAPSS1O43252 624 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 TNFRSF21O75509 655 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 C8AP07357 584 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF823P16415 610 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 IL12BP29460 328 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 PRAMEF19Q5SWL8 479 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF572Q7Z3I7 529 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-216ENST00000556083 NEK7Q8TDX7 302 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SNX33Q8WV41 574 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 OMA1Q96E52 524 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 RNF31Q96EP0 1072 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SLC35G5Q96KT7 338 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 CAPNS2Q96L46 248 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 TRIB3Q96RU7 358 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 BRINP2Q9C0B6 783 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 EHD1Q9H4M9 534 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 SP140LQ9H930 580 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ANKHQ9HCJ1 492 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 TRPV5Q9NQA5 729 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 ZIM2Q9NZV7 527 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 DNAJB9Q9UBS3 223 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 DHRS7Q9Y394 339 aa10.58□□□□□ -0.72
ACTN1-216ENST00000556083 WASHC1A8K0Z3 465 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 WASH3PC4AMC7 463 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 H3BUI4 141 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 CLDN5O00501 218 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 KLHL18O94889 574 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 RENP00797 406 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 HNRNPLP14866 589 aaKnown RBP eCLIP10.57□□□□□ -0.72
ACTN1-216ENST00000556083 CSNK2A2P19784 350 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-216ENST00000556083 CCR8P51685 355 aa10.57□□□□□ -0.72
ACTN1-216ENST00000556083 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms