RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CDKN1CP49918 316 aaPredicted RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 HK3P52790 923 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 GUCA2AQ02747 115 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 TMED1Q13445 227 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 PWP1Q13610 501 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 GTF2H2Q13888 395 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 PCBP2Q15366 365 aaKnown RBP eCLIP6.9□□□□□ -1.317e-11■■■■■ 50.5
TDP1-213ENST00000555880 FXNQ16595 210 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CYBRD1Q53TN4 286 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 RNF219Q5W0B1 726 aaPredicted RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 PTRHD1Q6GMV3 140 aaKnown RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 GTF2H2CQ6P1K8 395 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 FUT10Q6P4F1 479 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 DHRS4L2Q6PKH6 230 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 SLC2A7Q6PXP3 512 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CYP20A1Q6UW02 462 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CERS6Q6ZMG9 384 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CLEC4FQ8N1N0 589 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 PAF1Q8N7H5 531 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 DCBLD1Q8N8Z6 715 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 OR52B6Q8NGF0 335 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 OR8J3Q8NGG0 315 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 OVCA2Q8WZ82 227 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 C12orf43Q96C57 262 aaKnown RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 PDLIM5Q96HC4 596 aaKnown RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 PPP3R2Q96LZ3 170 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CEP295NLQ96MC4 621 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 PPM1MQ96MI6 270 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CGREF1Q99674 301 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 SLC30A3Q99726 388 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 SH3GL1Q99961 368 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 TUBA1CQ9BQE3 449 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 TTLL2Q9BWV7 592 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 NPLQ9BXD5 320 aaPredicted RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 UGT2B28Q9BY64 529 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 GPR62Q9BZJ7 368 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 PIF1Q9H611 641 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 RPF2Q9H7B2 306 aaKnown RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 POLR1BQ9H9Y6 1135 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 PREBQ9HCU5 417 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 SRRDQ9UH36 339 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 ZNF639Q9UID6 485 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 ZNF225Q9UK10 706 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 LRFN2Q9ULH4 789 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 EIF3LQ9Y262 564 aaKnown RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 POLR3HQ9Y535 204 aaPredicted RBP6.9□□□□□ -1.31
TDP1-213ENST00000555880 PCDHB7Q9Y5E2 793 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 ACTL7AQ9Y615 435 aa6.9□□□□□ -1.31
TDP1-213ENST00000555880 CASP8AP2Q9UKL3 1982 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 hCG_2014768A0A024R1R8 64 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 RGS14O43566 566 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 SNAP29O95721 258 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CLIC3O95833 236 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 HPRP00739 348 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 GNRH1P01148 92 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 MT-ND1P03886 318 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 G6PDP11413 515 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 ZNF7P17097 686 aaPredicted RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 HRH2P25021 359 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 RPL10P27635 214 aaKnown RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 DCKP27707 260 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CORO1AP31146 461 aaKnown RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 ZFP36L2P47974 494 aaKnown RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 TUFMP49411 452 aaKnown RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 GALK1P51570 392 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 ALDH3A2P51648 485 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CLCN7P51798 805 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 ACLYP53396 1101 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 TPD52P55327 224 aaPredicted RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 OR4D2P58180 307 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 ERVPABLB-1P60509 514 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 RHOAP61586 193 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 YBX1P67809 324 aaKnown RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 EPS8Q12929 822 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 TRIM32Q13049 653 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 TAF12Q16514 161 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CRY1Q16526 586 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 AP5B1Q2VPB7 878 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 OTUD3Q5T2D3 398 aaPredicted RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 ADGRF1Q5T601 910 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CACHD1Q5VU97 1274 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CCSAPQ6IQ19 270 aaPredicted RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 LETMD1Q6P1Q0 360 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 ZNF783Q6ZMS7 281 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 KCTD8Q6ZWB6 473 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 FKBP9P1Q75LS8 142 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 GOLGA7Q7Z5G4 137 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 MILR1Q7Z6M3 343 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 RALGPS2Q86X27 583 aaPredicted RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 GALNT13Q8IUC8 556 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 ZDHHC13Q8IUH4 622 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 SFRP1Q8N474 314 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 TTC30BQ8N4P2 665 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 BPIFB1Q8TDL5 484 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 LINC01599Q8WXQ3 324 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 POP5Q969H6 163 aaKnown RBP6.89□□□□□ -1.31
TDP1-213ENST00000555880 ESAMQ96AP7 390 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 GLT1D1Q96MS3 346 aa6.89□□□□□ -1.31
TDP1-213ENST00000555880 CDK15Q96Q40 435 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms