RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 ATP5OP48047 213 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 SEPHS1P49903 392 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 COPS2P61201 443 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 SH3BP2P78314 561 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 DMPKQ09013 629 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 OLIG2Q13516 323 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 GTF2H3Q13889 308 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 LDLRAP1Q5SW96 308 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 C6orf15Q6UXA7 325 aaPredicted RBP10.58□□□□□ -0.72
TDP1-212ENST00000555565 FAM83HQ6ZRV2 1179 aaPredicted RBP10.58□□□□□ -0.72
TDP1-212ENST00000555565 AMZ2Q86W34 360 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 RBM12BQ8IXT5 1001 aaKnown RBP10.58□□□□□ -0.72
TDP1-212ENST00000555565 GALNT6Q8NCL4 622 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 ACTL9Q8TC94 416 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 CXorf40BQ96DE9 158 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 PANX2Q96RD6 677 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 FSD1LQ9BXM9 530 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 ZCCHC2Q9C0B9 1178 aaKnown RBP10.58□□□□□ -0.72
TDP1-212ENST00000555565 GBA3Q9H227 469 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 LUC7LQ9NQ29 371 aaKnown RBP10.58□□□□□ -0.72
TDP1-212ENST00000555565 SMOXQ9NWM0 555 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 PKP3Q9Y446 797 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 PCDHGA9Q9Y5G4 932 aaKnown RBP10.58□□□□□ -0.72
TDP1-212ENST00000555565 PCDHA3Q9Y5H8 950 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 ARL5AQ9Y689 179 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 DUSP10Q9Y6W6 482 aa10.58□□□□□ -0.72
TDP1-212ENST00000555565 F8P00451 2351 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 PIPSLA2A3N6 862 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 SOWAHDA6NJG2 315 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 OR2AG2A6NM03 316 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 PJA2O43164 708 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 KCNJ13O60928 360 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 KATNA1O75449 491 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 ANXA9O76027 345 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 CBX6O95503 412 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 FECHP22830 423 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 ADRA1AP35348 466 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 CAPZBP47756 277 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 GEMP55040 296 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 OTUD4Q01804 1114 aaKnown RBP10.57□□□□□ -0.72
TDP1-212ENST00000555565 FOXM1Q08050 763 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 LAMB3Q13751 1172 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 ITGA9Q13797 1035 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 NFE2L1Q14494 772 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 RPE65Q16518 533 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 CCDC181Q5TID7 509 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 JMJD6Q6NYC1 403 aaPredicted RBP10.57□□□□□ -0.72
TDP1-212ENST00000555565 TMEM220Q6QAJ8 160 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 RANBP10Q6VN20 620 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 PRSS42Q7Z5A4 293 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 GPR150Q8NGU9 434 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 KLHL6Q8WZ60 621 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 FAM118BQ9BPY3 351 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 APOL2Q9BQE5 337 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 FICDQ9BVA6 458 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 OSBPL8Q9BZF1 889 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 ULBP3Q9BZM4 244 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 TWSG1Q9GZX9 223 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 RAB33BQ9H082 229 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 AKIRIN1Q9H9L7 192 aaPredicted RBP10.57□□□□□ -0.72
TDP1-212ENST00000555565 EPHA6Q9UF33 1036 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 KCND3Q9UK17 655 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 PSMD13Q9UNM6 376 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 EFR3BQ9Y2G0 817 aa10.57□□□□□ -0.72
TDP1-212ENST00000555565 REXO2Q9Y3B8 237 aaKnown RBP10.57□□□□□ -0.72
TDP1-212ENST00000555565 EPN1Q9Y6I3 576 aaPredicted RBP10.57□□□□□ -0.72
TDP1-212ENST00000555565 DNMT3AQ9Y6K1 912 aaPredicted RBP10.57□□□□□ -0.72
TDP1-212ENST00000555565 SETD2Q9BYW2 2564 aaPredicted RBP10.57□□□□□ -0.72
TDP1-212ENST00000555565 PIKFYVEQ9Y2I7 2098 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 MACROD2A1Z1Q3 448 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 STX7O15400 261 aaKnown RBP10.56□□□□□ -0.72
TDP1-212ENST00000555565 RASSF9O75901 435 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 PRAMEF1O95521 474 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 RBP3P10745 1247 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 LPOP22079 712 aaPredicted RBP10.56□□□□□ -0.72
TDP1-212ENST00000555565 PSMB4P28070 264 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 PTPN7P35236 360 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 HALP42357 657 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 ZNF75DP51815 510 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 EIF3EP60228 445 aaKnown RBP10.56□□□□□ -0.72
TDP1-212ENST00000555565 PPP1CAP62136 330 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 XIAPP98170 497 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 MSLNQ13421 630 aaPredicted RBP10.56□□□□□ -0.72
TDP1-212ENST00000555565 TAF1AQ15573 450 aaPredicted RBP10.56□□□□□ -0.72
TDP1-212ENST00000555565 ANKRD20A2Q5SQ80 823 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 FNBP1LQ5T0N5 605 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 ANKRD20A1Q5TYW2 823 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 CACHD1Q5VU97 1274 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 ANKRD20A3Q5VUR7 823 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 METRNLQ641Q3 311 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 CPZQ66K79 652 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 ITPRIPL1Q6GPH6 555 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 IRGCQ6NXR0 463 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 AADACL2Q6P093 401 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 FAM92BQ6ZTR7 304 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 DET1Q7L5Y6 550 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 CDKL3Q8IVW4 592 aaPredicted RBP10.56□□□□□ -0.72
TDP1-212ENST00000555565 BEND7Q8N7W2 519 aaPredicted RBP10.56□□□□□ -0.72
TDP1-212ENST00000555565 OR4K2Q8NGD2 314 aa10.56□□□□□ -0.72
TDP1-212ENST00000555565 ZNF398Q8TD17 642 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms