RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ALDOAP04075 364 aaKnown RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 CELA2BP08218 269 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 INHBAP08476 426 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 ITGA2BP08514 1039 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 NR1D1P20393 614 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 CSRP1P21291 193 aaKnown RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 PBLDP30039 288 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 ABCG1P45844 678 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 PRLHRP49683 370 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 SERPINB9P50453 376 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 CTSCP53634 463 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 DAB2P98082 770 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 MPP1Q00013 466 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 TIAL1Q01085 375 aaKnown RBP eCLIP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 TYSND1Q2T9J0 566 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 C6orf132Q5T0Z8 1188 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 MROH9Q5TGP6 573 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 CNSTQ6PJW8 725 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 TMEM220Q6QAJ8 160 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 DBX2Q6ZNG2 339 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 LDB1Q86U70 411 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 ZC3HC1Q86WB0 502 aaKnown RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 CILP2Q8IUL8 1156 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 SRRM1Q8IYB3 904 aaKnown RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 ARL10Q8N8L6 244 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 BANPQ8N9N5 519 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 AVL9Q8NBF6 648 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 FAM46DQ8NEK8 389 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 CDKL2Q92772 493 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 SGF29Q96ES7 293 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 CNDP2Q96KP4 475 aaKnown RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 CCDC68Q9H2F9 335 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 STN1Q9H668 368 aaKnown RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 KLC4Q9NSK0 619 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 INTS10Q9NVR2 710 aaKnown RBP10.72□□□□□ -0.69
SHMT2-218ENST00000555213 TAAR2Q9P1P5 351 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 ZFATQ9P243 1243 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 GNPTGQ9UJJ9 305 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 FBXO5Q9UKT4 447 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 PCOLCE2Q9UKZ9 415 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 KCNK6Q9Y257 313 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 PCDHB1Q9Y5F3 818 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 TMEM131Q92545 1883 aa10.72□□□□□ -0.69
SHMT2-218ENST00000555213 MGAT4DA6NG13 374 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 PDZK1P1A8MUH7 402 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 TRIM38O00635 465 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 SIGLEC6O43699 453 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 LRP4O75096 1905 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 SPAG7O75391 227 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 POP7O75817 140 aaKnown RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 LDOC1O95751 146 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 MT-ND3P03897 115 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 FUCA1P04066 466 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 PYGBP11216 843 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 BRAFP15056 766 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 KRT4P19013 534 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 IDSP22304 550 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 AK4P27144 223 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 HPDP32754 393 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 GMPRP36959 345 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 CCNFP41002 786 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 HALP42357 657 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 SLC1A2P43004 574 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 ATP1A2P50993 1020 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 DUSP3P51452 185 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 NOVA1P51513 510 aaKnown RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 CLCNKAP51800 687 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 PGGT1BP53609 377 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 LIMK2P53671 638 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 SLC18A1P54219 525 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 CSE1LP55060 971 aaKnown RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 WDR4P57081 412 aaKnown RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 B4GALNT1Q00973 533 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 DNAJC3Q13217 504 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 NR0B2Q15466 257 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 SYTL3Q4VX76 610 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 PPM1JQ5JR12 505 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 PTRHD1Q6GMV3 140 aaKnown RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF549Q6P9A3 640 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 CDHR3Q6ZTQ4 885 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 KIAA0408Q6ZU52 694 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 ERMP1Q7Z2K6 904 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 GALNT7Q86SF2 657 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 PIP4P1Q86T03 277 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 ZNF547Q8IVP9 402 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 C4orf33Q8N1A6 199 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 FAM181AQ8N9Y4 354 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 DEFB124Q8NES8 71 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 CCL4L1Q8NHW4 92 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 FAM76AQ8TAV0 307 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 HM13Q8TCT9 377 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 LINC00615Q96LM1 132 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 PANX3Q96QZ0 392 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 CCM2Q9BSQ5 444 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 BOCQ9BWV1 1114 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 STMN4Q9H169 189 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 C12orf65Q9H3J6 166 aaKnown RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 SSU72Q9NP77 194 aaKnown RBP10.71□□□□□ -0.69
SHMT2-218ENST00000555213 NSMCE4AQ9NXX6 385 aa10.71□□□□□ -0.69
SHMT2-218ENST00000555213 SIRPGQ9P1W8 387 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms