RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CALB1P05937 261 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 KRT3P12035 628 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 GNSP15586 552 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 GOT1P17174 413 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 GPD1P21695 349 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 RRM1P23921 792 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 CCND1P24385 295 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 CD27P26842 260 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SDC4P31431 198 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SLC8A1P32418 973 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 RFC1P35251 1148 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 NNMTP40261 264 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 PBX1P40424 430 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 PRKCIP41743 596 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SERPINH1P50454 418 aaKnown RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 CCR5P51681 352 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 VAV2P52735 878 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ATXN3P54252 364 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 FAM193AP78312 1265 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SHC2P98077 582 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 GFPT1Q06210 699 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ODF1Q14990 250 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 DLG2Q15700 870 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ASIC2Q16515 512 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 CDO1Q16878 200 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 KIF19Q2TAC6 998 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 FLYWCH1Q4VC44 716 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 KCNT1Q5JUK3 1230 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 PIP5KL1Q5T9C9 394 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ACAD10Q6JQN1 1059 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 DNAJC24Q6P3W2 148 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 WDR59Q6PJI9 974 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 LINGO4Q6UY18 593 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF783Q6ZMS7 281 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF571Q7Z3V5 609 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 RD3Q7Z3Z2 195 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SETD3Q86TU7 594 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ADGRG3Q86Y34 549 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 DNAAF5Q86Y56 855 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 MCOLN2Q8IZK6 566 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 OR2A12Q8NGT7 310 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 OR2T34Q8NGX1 318 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 GANCQ8TET4 914 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 FAM172AQ8WUF8 416 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 OR8D1Q8WZ84 308 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SNX19Q92543 992 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ARHGEF2Q92974 986 aaKnown RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 VOPP1Q96AW1 172 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ARRDC3Q96B67 414 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 BIRC7Q96CA5 298 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 TBC1D31Q96DN5 1066 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 BOD1Q96IK1 185 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 CAMK1GQ96NX5 476 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 MCEEQ96PE7 176 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 PPP1R9BQ96SB3 815 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 VRK1Q99986 396 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 AIFM2Q9BRQ8 373 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 MAGEB5Q9BZ81 275 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ZYG11BQ9C0D3 744 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 NAT10Q9H0A0 1025 aaKnown RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 IL21RQ9HBE5 538 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SLAMF7Q9NQ25 335 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SEPT11Q9NVA2 429 aaKnown RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 TMEM248Q9NWD8 314 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 FAM30AQ9NZY2 134 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ADAM22Q9P0K1 906 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 PTGFRNQ9P2B2 879 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 LRIT1Q9P2V4 623 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 NCKAP1Q9Y2A7 1128 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 EPG5Q9HCE0 2579 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 KNTC1P50748 2209 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 IGF2RP11717 2491 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 FRYQ5TBA9 3013 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 GOLGA4Q13439 2230 aaKnown RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CXorf51AA0A1B0GTR3 108 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 SPAARA0A1B0GVQ0 90 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 FAM47DPA6NHR8 397 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 LRRC14BA6NHZ5 514 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 LRRC72A6NJI9 287 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 MGST3O14880 152 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 MCF2LO15068 1137 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 VILLO15195 856 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 LATO43561 262 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 SH3BP5O60239 455 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 SRGAP2O75044 1071 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CBFA2T3O75081 653 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 RNASEH2AO75792 299 aaKnown RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CER1O95813 267 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 PLEKP08567 350 aaPredicted RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CCDC172P0C7W6 258 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF883P0CG24 379 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 MTHFD1P11586 935 aaKnown RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CEACAM1P13688 526 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 TNFAIP3P21580 790 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 OR1E1P30953 314 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CHRNA3P32297 505 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 CSNK1EP49674 416 aaKnown RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 TAS2R38P59533 333 aa4.2□□□□□ -1.74
VTI1B-203ENST00000554636 RPL7AP62424 266 aaKnown RBP4.2□□□□□ -1.74
VTI1B-203ENST00000554636 KRT83P78385 493 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms