RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 FGF3P11487 239 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-213ENST00000554600 PPARGP37231 505 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-213ENST00000554600 SEPHS1P49903 392 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 UCNP55089 124 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 TMPRSS3P57727 454 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 CRADDP78560 199 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 BRD3Q15059 726 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 PCID2Q5JVF3 399 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 KLHL35Q6PF15 583 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 FAM92BQ6ZTR7 304 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 ZFAND4Q86XD8 727 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 RASGEF1CQ8N431 466 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 LILRA3Q8N6C8 439 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-213ENST00000554600 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-213ENST00000554600 OR4L1Q8NH43 312 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 RMDN2Q96LZ7 410 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 RANBP9Q96S59 729 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 CCM2Q9BSQ5 444 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 CPNE5Q9HCH3 593 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 OGFRQ9NZT2 677 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 FOXJ2Q9P0K8 574 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 PCDHB11Q9Y5F2 797 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 CCDC88CQ9P219 2028 aa10.43□□□□□ -0.74
SHMT2-213ENST00000554600 MN1Q10571 1320 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-213ENST00000554600 IGLV3-16A0A075B6K0 115 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 C9orf172C9J069 976 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 AP3B1O00203 1094 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 QSOX1O00391 747 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 SGTAO43765 313 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 AP2A2O94973 939 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 FTH1P02794 183 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 OR56A5P0C7T3 313 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 MGAT1P26572 445 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 FOXN2P32314 431 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 COILP38432 576 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-213ENST00000554600 NSG1P42857 185 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 CAPZBP47756 277 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 PREPP48147 710 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 LEPRP48357 1165 aaKnown RBP10.42□□□□□ -0.74
SHMT2-213ENST00000554600 NPY2RP49146 381 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 SARNPP82979 210 aaKnown RBP10.42□□□□□ -0.74
SHMT2-213ENST00000554600 FOXM1Q08050 763 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 CLN3Q13286 438 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 BOP1Q14137 746 aaKnown RBP10.42□□□□□ -0.74
SHMT2-213ENST00000554600 ITIH4Q14624 930 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 TGIF1Q15583 401 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 SYTL3Q4VX76 610 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 DCAF12Q5T6F0 453 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 ARHGAP40Q5TG30 622 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 CACHD1Q5VU97 1274 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 LYPLAL1Q5VWZ2 237 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 ARMC6Q6NXE6 501 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 TTC27Q6P3X3 843 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 CASC4Q6P4E1 433 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 CCDC137Q6PK04 289 aaKnown RBP10.42□□□□□ -0.74
SHMT2-213ENST00000554600 ARHGAP22Q7Z5H3 698 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 OR13J1Q8NGT2 312 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 COG1Q8WTW3 980 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 ELMO1Q92556 727 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 PMEPA1Q969W9 287 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 ZDHHC12Q96GR4 267 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 PDLIM2Q96JY6 352 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 LINC00615Q96LM1 132 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-213ENST00000554600 C9orf72Q96LT7 481 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 ZNF778Q96MU6 729 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 FERD3LQ96RJ6 166 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 CTRCQ99895 268 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 ASPSCR1Q9BZE9 553 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 IL22Q9GZX6 179 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 COG4Q9H9E3 785 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 CHRAC1Q9NRG0 131 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 CATSPERZQ9NTU4 200 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 PDP2Q9P2J9 529 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 HEBP2Q9Y5Z4 205 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 B3GALT1Q9Y5Z6 326 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 COLEC10Q9Y6Z7 277 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 PIEZO2Q9H5I5 2752 aa10.42□□□□□ -0.74
SHMT2-213ENST00000554600 LOC400499M0QZD8 3231 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 C17orf113A0A1B0GUU1 675 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 TCRBV7S3A2A0A539 114 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 USP27XA6NNY8 438 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 F8W8V4 182 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 ZNF185O15231 689 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 KIF1CO43896 1103 aaKnown RBP10.41□□□□□ -0.74
SHMT2-213ENST00000554600 PHF2O75151 1096 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 C9P02748 559 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 LIPCP11150 499 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 ITGB6P18564 788 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 TPSB2P20231 275 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 CD82P27701 267 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 NDUFS1P28331 727 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 NMBRP28336 390 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 ARCN1P48444 511 aaKnown RBP10.41□□□□□ -0.74
SHMT2-213ENST00000554600 ARL4DP49703 201 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 CSE1LP55060 971 aaKnown RBP10.41□□□□□ -0.74
SHMT2-213ENST00000554600 RAB15P59190 212 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 GNG11P61952 73 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 CDK16Q00536 496 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 PPP1R7Q15435 360 aa10.41□□□□□ -0.74
SHMT2-213ENST00000554600 TPSAB1Q15661 275 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms