RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SYCP2LQ5T4T6 812 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 ANKRD22Q5VYY1 191 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 IZUMO3Q5VZ72 239 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 Q6ZS52 159 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 STK40Q8N2I9 435 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 NAT8LQ8N9F0 302 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 IL17RCQ8NAC3 791 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 PLA2G15Q8NCC3 412 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 OR2AP1Q8NGE2 309 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 OR14K1Q8NGZ2 314 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 RPLP0P6Q8NHW5 317 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 CCHCR1Q8TD31 782 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 CPT1BQ92523 772 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 HOXB13Q92826 284 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 LRRC45Q96CN5 670 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 SNF8Q96H20 258 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 GDAP1L1Q96MZ0 367 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 UHRF1Q96T88 793 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 GABRG3Q99928 467 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 POLR1EQ9GZS1 481 aaKnown RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 RAB17Q9H0T7 212 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 MEGF9Q9H1U4 602 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 DPH5Q9H2P9 285 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 ANKZF1Q9H8Y5 726 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 EPB41L5Q9HCM4 733 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 LTB4R2Q9NPC1 389 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 PRSS16Q9NQE7 514 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 AASDHPPTQ9NRN7 309 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 ING3Q9NXR8 418 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 FAM153AQ9UHL3 310 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 SLC8A2Q9UPR5 921 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 UTP11Q9Y3A2 253 aaKnown RBP6.31□□□□□ -1.4
SCFD1-212ENST00000554486 CACNA1IQ9P0X4 2223 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 VCANP13611 3396 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 NUMA1Q14980 2115 aa6.31□□□□□ -1.4
SCFD1-212ENST00000554486 A0A1W2PQF6 199 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 TARSL2A2RTX5 802 aaKnown RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 TRAFD1O14545 582 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 HTRA2O43464 458 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 LAMTOR5O43504 91 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 ANXA9O76027 345 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 SUN1O94901 812 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 PIGNO95427 931 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 AP2A1O95782 977 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 AGTP01019 485 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 PDGFBP01127 241 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 APRTP07741 180 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 SERPINF2P08697 491 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 TPSB2P20231 275 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 NTSR1P30989 418 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 GRIA1P42261 906 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 RECQLP46063 649 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 CARSP49589 748 aaKnown RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 METAP1P53582 386 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 ITGA8P53708 1063 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 GEMP55040 296 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 SESN2P58004 480 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 AP1S1P61966 158 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 TUBB4BP68371 445 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 BASP1P80723 227 aaKnown RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 MALLQ13021 153 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 DUSP8Q13202 625 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 MPP3Q13368 585 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 OLIG2Q13516 323 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 SPARCL1Q14515 664 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 PRPSAP1Q14558 356 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 E2F5Q15329 346 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 TPSAB1Q15661 275 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 ERCC6LQ2NKX8 1250 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 HIBCHQ6NVY1 386 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 ZDHHC24Q6UX98 284 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 CAMK1DQ8IU85 385 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 GLB1L2Q8IW92 636 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 CHPFQ8IZ52 775 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 RYBPQ8N488 228 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 PPM1NQ8N819 430 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 PJA1Q8NG27 643 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 OR2I1PQ8NGU4 316 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 PRCCQ92733 491 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 EDAQ92838 391 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 ART4Q93070 314 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 CLDN23Q96B33 292 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 ERLEC1Q96DZ1 483 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 PPP1R2P1Q96PQ5 205 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 TRIB3Q96RU7 358 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 GPHA2Q96T91 129 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 HEPHQ9BQS7 1158 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 FICDQ9BVA6 458 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 CPEB1Q9BZB8 566 aaKnown RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 CDH19Q9H159 772 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 LMAN1LQ9HAT1 526 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 GDF3Q9NR23 364 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 EIF2B3Q9NR50 452 aaKnown RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 VPS45Q9NRW7 570 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 ZDHHC18Q9NUE0 388 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 HAUS2Q9NVX0 235 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 C2orf42Q9NWW7 574 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 HECAQ9UBI9 543 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms