RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 STMN1P16949 149 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 MSH3P20585 1137 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 HOXD12P35452 270 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 UBE2IP63279 158 aaKnown RBP6.62□□□□□ -1.35
LINC00517-202ENST00000554257 RPA4Q13156 261 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 LRRC8EQ6NSJ5 796 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 LRRTM4Q86VH4 590 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 SFTPA2Q8IWL1 248 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 C4orf33Q8N1A6 199 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 PGBD3Q8N328 593 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 PDPRQ8NCN5 879 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 HM13Q8TCT9 377 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 GANCQ8TET4 914 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 UBTD2Q8WUN7 234 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 KIAA1191Q96A73 305 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 MRRFQ96E11 262 aaKnown RBP6.62□□□□□ -1.35
LINC00517-202ENST00000554257 NRTNQ99748 197 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 MYOCQ99972 504 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 TMEM79Q9BSE2 394 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 CCDC134Q9H6E4 229 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 RDH14Q9HBH5 336 aa6.62□□□□□ -1.35
LINC00517-202ENST00000554257 PHPT1Q9NRX4 125 aaPredicted RBP6.62□□□□□ -1.35
LINC00517-202ENST00000554257 KLHL33A6NCF5 533 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 CDC7O00311 574 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 KMOO15229 486 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 RGS16O15492 202 aaPredicted RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 PRICKLE3O43900 615 aaPredicted RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 MAGEC1O60732 1142 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 KCNJ13O60928 360 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 KRT37O76014 449 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 FGF3P11487 239 aaPredicted RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 GGT5P36269 586 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 CDKL1Q00532 357 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 PCDH1Q08174 1060 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 NR1D2Q14995 579 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 ACAP2Q15057 778 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 CCSMST1Q4G0I0 132 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 LVRNQ6Q4G3 990 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 ABRAXAS1Q6UWZ7 409 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 PIWIL4Q7Z3Z4 852 aaKnown RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 PDZD3Q86UT5 571 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 FSTL5Q8N475 847 aaPredicted RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 SPATA6LQ8N4H0 392 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 GPATCH11Q8N954 259 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 LOXL4Q96JB6 756 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 ZNF514Q96K75 400 aaPredicted RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 CABS1Q96KC9 395 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 C20orf27Q9GZN8 174 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 TMEM168Q9H0V1 697 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 TFB2MQ9H5Q4 396 aaKnown RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 PCMTD2Q9NV79 361 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 TRNAU1APQ9NX07 287 aaKnown RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 TAS2R13Q9NYV9 303 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 SIRPGQ9P1W8 387 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 ZNF292O60281 2723 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 KRT87PA6NCN2 255 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 SMIM23A6NLE4 172 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 GOLGA8RI6L899 631 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 QSOX1O00391 747 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 STK25O00506 426 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 LIN7AO14910 233 aaPredicted RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 OR56A5P0C7T3 313 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 NBL1P41271 181 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 PREPP48147 710 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 CTBSQ01459 385 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 USP10Q14694 798 aaKnown RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 PHKG1Q16816 387 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 OGFOD3Q6PK18 319 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 LPCAT2Q7L5N7 544 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 ZNF438Q7Z4V0 828 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 PARGQ86W56 976 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 SRRM1Q8IYB3 904 aaKnown RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 TCP10LQ8TDR4 215 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 TSACCQ96A04 125 aaPredicted RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 CCDC77Q9BR77 488 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 ZNF624Q9P2J8 865 aaPredicted RBP6.61□□□□□ -1.35
LINC00517-202ENST00000554257 TBC1D29Q9UFV1 150 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 OARD1Q9Y530 152 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 SNX11Q9Y5W9 270 aa6.61□□□□□ -1.35
LINC00517-202ENST00000554257 TK2O00142 265 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 BCAT2O15382 392 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 NOBOXO60393 691 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 KERAO60938 352 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 NDUFS2O75306 463 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 POP7O75817 140 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 CDK14O94921 469 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 C1orf105O95561 183 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 FTH1P02794 183 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 LTA4HP09960 611 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 CCDC166P0CW27 439 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SLC6A12P48065 614 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 BOP1Q14137 746 aaKnown RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 LYSMD4Q5XG99 296 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 FAM219BQ5XKK7 198 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 RGS9BPQ6ZS82 235 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SLC25A45Q8N413 288 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 BAHD1Q8TBE0 780 aaPredicted RBP6.6□□□□□ -1.35
LINC00517-202ENST00000554257 OR2M4Q96R27 311 aa6.6□□□□□ -1.35
LINC00517-202ENST00000554257 SLC12A9Q9BXP2 914 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms