RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 GALNT3Q14435 633 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 MYBPC3Q14896 1274 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 LLGL1Q15334 1064 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 QPCTQ16769 361 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 PTCHD3Q3KNS1 767 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 KRTAP21-3Q3LHN1 58 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 CRB2Q5IJ48 1285 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 PDPK2PQ6A1A2 396 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 SP5Q6BEB4 398 aaPredicted RBP8.28□□□□□ -1.08
NPC2-204ENST00000553490 PLEKHA7Q6IQ23 1121 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 IGFL3Q6UXB1 125 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 Q6ZS92 163 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 OOSP2Q86WS3 158 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 ZNF547Q8IVP9 402 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 GALNT16Q8N428 558 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 ZADH2Q8N4Q0 377 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 TRAM1L1Q8N609 369 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 CALR3Q96L12 384 aaKnown RBP8.28□□□□□ -1.08
NPC2-204ENST00000553490 LURAP1Q96LR2 239 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 KCNF1Q9H3M0 494 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 ACTR5Q9H9F9 607 aaPredicted RBP8.28□□□□□ -1.08
NPC2-204ENST00000553490 IMP3Q9NV31 184 aaKnown RBP8.28□□□□□ -1.08
NPC2-204ENST00000553490 PCMTD2Q9NV79 361 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 NFKBIL1Q9UBC1 381 aaPredicted RBP8.28□□□□□ -1.08
NPC2-204ENST00000553490 NENFQ9UMX5 172 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 BTRCQ9Y297 605 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 PCM1Q15154 2024 aa8.28□□□□□ -1.08
NPC2-204ENST00000553490 A0A087X0T9 212 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 TMEM191CA6NGB0 347 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 DDX3XO00571 662 aaKnown RBP eCLIP8.27□□□□□ -1.095e-7■■■■■ 26.8
NPC2-204ENST00000553490 ZSCAN12O43309 604 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 KLHL41O60662 606 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 CDK14O94921 469 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 HLA-DQB2P05538 268 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 FAM228BP0C875 321 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 TCF4P15884 667 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 CES1P23141 567 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 PTGER4P35408 488 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 PCK1P35558 622 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 NIPAL4Q0D2K0 466 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 GTF2H3Q13889 308 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 KHDC1Q4VXA5 237 aaKnown RBP8.27□□□□□ -1.09
NPC2-204ENST00000553490 DCAF10Q5QP82 559 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 TIGD7Q6NT04 549 aaPredicted RBP8.27□□□□□ -1.09
NPC2-204ENST00000553490 ARMC6Q6NXE6 501 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 ALKBH5Q6P6C2 394 aaKnown RBP8.27□□□□□ -1.09
NPC2-204ENST00000553490 FBXO38Q6PIJ6 1188 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 RAD9BQ6WBX8 426 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 C11orf96Q7Z7L8 435 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 FJX1Q86VR8 437 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 LRRC49Q8IUZ0 686 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 GPR26Q8NDV2 337 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 ARRDC2Q8TBH0 407 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 MAML1Q92585 1016 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 TRIM11Q96F44 468 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 FER1L6-AS2Q96M78 137 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 IP6K3Q96PC2 410 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 WDR77Q9BQA1 342 aaPredicted RBP8.27□□□□□ -1.09
NPC2-204ENST00000553490 SLC7A5P2Q9GIP4 190 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 ISCUQ9H1K1 167 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 ZNF552Q9H707 407 aaPredicted RBP8.27□□□□□ -1.09
NPC2-204ENST00000553490 ZFYVE1Q9HBF4 777 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 PCDH18Q9HCL0 1135 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 RAD18Q9NS91 495 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 RBM22Q9NW64 420 aaKnown RBP eCLIP8.27□□□□□ -1.09
NPC2-204ENST00000553490 HRASLS2Q9NWW9 162 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 COPG2Q9UBF2 871 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 ITGB1BP2Q9UKP3 347 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 PSMD13Q9UNM6 376 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 NOVA2Q9UNW9 492 aaKnown RBP8.27□□□□□ -1.09
NPC2-204ENST00000553490 SVILO95425 2214 aa8.27□□□□□ -1.09
NPC2-204ENST00000553490 NUP210LQ5VU65 1888 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 GOLGA6L9A6NEM1 432 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 SOWAHDA6NJG2 315 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 BTNL10A8MVZ5 291 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 ANKRD66B4E2M5 251 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 TMEM150CB9EJG8 249 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 PEX12O00623 359 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 MATN3O15232 486 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 LDB2O43679 373 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 IGHEP01854 428 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 CCDC175P0C221 793 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 PIRTP0C851 137 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 MYBL1P10243 752 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 MTHFD1P11586 935 aaKnown RBP8.26□□□□□ -1.09
NPC2-204ENST00000553490 EDN3P14138 238 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 CA5AP35218 305 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 CD86P42081 329 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 MAGEA1P43355 309 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 ARCN1P48444 511 aaKnown RBP8.26□□□□□ -1.09
NPC2-204ENST00000553490 KPNA2P52292 529 aaKnown RBP8.26□□□□□ -1.09
NPC2-204ENST00000553490 GALNT2Q10471 571 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 XRCC4Q13426 336 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 TCEAL1Q15170 157 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 RPE65Q16518 533 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 DUS1LQ6P1R4 473 aaKnown RBP8.26□□□□□ -1.09
NPC2-204ENST00000553490 KCNMB4Q86W47 210 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 CARFQ8N187 725 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 NXPE1Q8N323 547 aa8.26□□□□□ -1.09
NPC2-204ENST00000553490 OR1L3Q8NH93 324 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms