RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CDKN2AP42771 156 aaKnown RBP4.96□□□□□ -1.62
SYNE2-210ENST00000553455 NANOS2P60321 138 aaKnown RBP4.96□□□□□ -1.62
SYNE2-210ENST00000553455 PLIN5Q00G26 463 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 ZBTB17Q13105 803 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 GTF2H2Q13888 395 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 VWC2Q2TAL6 325 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 C1QTNF12Q5T7M4 302 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 GTF2H2CQ6P1K8 395 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 TRAT1Q6PIZ9 186 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 FAM198BQ6UWH4 519 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 MEPCEQ7L2J0 689 aaKnown RBP4.96□□□□□ -1.62
SYNE2-210ENST00000553455 GALNTL5Q7Z4T8 443 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 SPATA2LQ8IUW3 424 aaPredicted RBP4.96□□□□□ -1.62
SYNE2-210ENST00000553455 THNSL1Q8IYQ7 743 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 CEP57L1Q8IYX8 460 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 EXD1Q8NHP7 514 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 BICD1Q96G01 975 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 TMEM204Q9BSN7 226 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 EBF2Q9HAK2 575 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 KLHL1Q9NR64 748 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 TCP11L1Q9NUJ3 509 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 ANAPC5Q9UJX4 755 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 YIPF1Q9Y548 306 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 TRIP12Q14669 1992 aaPredicted RBP4.96□□□□□ -1.62
SYNE2-210ENST00000553455 CGNL1Q0VF96 1302 aa4.96□□□□□ -1.62
SYNE2-210ENST00000553455 CTAGE9A4FU28 777 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 HNRNPCL2B2RXH8 293 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 ANKRD66B4E2M5 251 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 IPO8O15397 1037 aaKnown RBP4.95□□□□□ -1.62
SYNE2-210ENST00000553455 BUD23O43709 281 aaKnown RBP4.95□□□□□ -1.62
SYNE2-210ENST00000553455 BMP10O95393 424 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 ZBTB11O95625 1053 aaPredicted RBP4.95□□□□□ -1.62
SYNE2-210ENST00000553455 CTAGE8P0CG41 777 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 SCG2P13521 617 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 PLA2G2AP14555 144 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 ACHEP22303 614 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 GNL1P36915 607 aaPredicted RBP4.95□□□□□ -1.62
SYNE2-210ENST00000553455 MMP15P51511 669 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 POLGP54098 1239 aaPredicted RBP4.95□□□□□ -1.62
SYNE2-210ENST00000553455 DSCR9P59020 149 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 PPARDQ03181 441 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 HSPB3Q12988 150 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 SCARB2Q14108 478 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 PTPRCAPQ14761 206 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 HECTD3Q5T447 861 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 GRTP1Q5TC63 336 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 OR7E24Q6IFN5 339 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 DCLRE1AQ6PJP8 1040 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 KMT5CQ86Y97 462 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 CTAGE4Q8IX94 777 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.95□□□□□ -1.62
SYNE2-210ENST00000553455 MAML2Q8IZL2 1156 aaPredicted RBP4.95□□□□□ -1.62
SYNE2-210ENST00000553455 MOSPD2Q8NHP6 518 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 SEMA4DQ92854 862 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 ZBTB9Q96C00 473 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 SPDL1Q96EA4 605 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 CDCA5Q96FF9 252 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 SLX1AQ9BQ83 275 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 NEURL2Q9BR09 285 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 ADPGKQ9BRR6 497 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 UBTD1Q9HAC8 227 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 LRRC4Q9HBW1 653 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 MRGBPQ9NV56 204 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 MIOSQ9NXC5 875 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 MALT1Q9UDY8 824 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 RALYQ9UKM9 306 aaKnown RBP4.95□□□□□ -1.62
SYNE2-210ENST00000553455 LIPGQ9Y5X9 500 aa4.95□□□□□ -1.62
SYNE2-210ENST00000553455 TEX13DA0A0J9YY54 714 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-210ENST00000553455 MAGEA13PA6NCF6 341 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 PTGESO14684 152 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 GPR137BO60478 399 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 TBCAO75347 108 aaKnown RBP4.94□□□□□ -1.62
SYNE2-210ENST00000553455 LDLRP01130 860 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 RPN1P04843 607 aaKnown RBP4.94□□□□□ -1.62
SYNE2-210ENST00000553455 OR2T7P0C7T2 308 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 CDH1P12830 882 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 DAOP14920 347 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 ERCC2P18074 760 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 CYP11B2P19099 503 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 CCKBRP32239 447 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 PCGF2P35227 344 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 ARCN1P48444 511 aaKnown RBP4.94□□□□□ -1.62
SYNE2-210ENST00000553455 AMPHP49418 695 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 THBS3P49746 956 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 NPY4RP50391 375 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 ACSM1Q08AH1 577 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 PRKAA1Q13131 559 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 TNIP1Q15025 636 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 STXBP5Q5T5C0 1151 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 PLXDC2Q6UX71 529 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 DGLUCYQ7Z3D6 616 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 ARMC9Q7Z3E5 817 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 RBM23Q86U06 439 aaKnown RBP4.94□□□□□ -1.62
SYNE2-210ENST00000553455 CAMKVQ8NCB2 501 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 LNX1Q8TBB1 728 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-210ENST00000553455 RTP4Q96DX8 246 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 SIPA1Q96FS4 1042 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 OXNAD1Q96HP4 312 aaPredicted RBP4.94□□□□□ -1.62
SYNE2-210ENST00000553455 LRRC3BQ96PB8 259 aa4.94□□□□□ -1.62
SYNE2-210ENST00000553455 FNDC11Q9BVV2 318 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms