RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 GABREP78334 506 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 PLOD1Q02809 727 aaPredicted RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 CFHR1Q03591 330 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 NKAIN2Q5VXU1 208 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 HIBCHQ6NVY1 386 aaPredicted RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 TMEM71Q6P5X7 295 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 ZNF449Q6P9G9 518 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 CES3Q6UWW8 571 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 ZNF574Q6ZN55 896 aaPredicted RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 MAATS1Q7Z4T9 603 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 LILRA3Q8N6C8 439 aaPredicted RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 ZNF669Q96BR6 464 aaPredicted RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 STAMBPL1Q96FJ0 436 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 SNF8Q96H20 258 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 AHCYL2Q96HN2 611 aaKnown RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 FCRL3Q96P31 734 aaPredicted RBP18.05■□□□□ 0.48
CPSF2-202ENST00000553427 TRIM51Q9BSJ1 452 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 NAT9Q9BTE0 207 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 TSSK1BQ9BXA7 367 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 TBC1D10AQ9BXI6 508 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 FOXP3Q9BZS1 431 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 PSMD13Q9UNM6 376 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 RPS6KL1Q9Y6S9 549 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 ACACAQ13085 2346 aa18.05■□□□□ 0.48
CPSF2-202ENST00000553427 MN1Q10571 1320 aaPredicted RBP18.04■□□□□ 0.48
CPSF2-202ENST00000553427 IGHV5-10-1A0A0J9YXX1 117 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 PFDN6O15212 129 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 BRINP1O60477 761 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 THRAP10827 490 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 CYP4F3Q08477 520 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 CBLBQ13191 982 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 GPR18Q14330 331 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 USP53Q70EK8 1073 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 SDCCAG8Q86SQ7 713 aaPredicted RBP18.04■□□□□ 0.48
CPSF2-202ENST00000553427 PROSER1Q86XN7 944 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 LMNTD2Q8IXW0 634 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 MDM1Q8TC05 714 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 PRR11Q96HE9 360 aaPredicted RBP18.04■□□□□ 0.48
CPSF2-202ENST00000553427 C12orf66Q96MD2 445 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 INSM2Q96T92 566 aaPredicted RBP18.04■□□□□ 0.48
CPSF2-202ENST00000553427 CARD6Q9BX69 1037 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 P2RY12Q9H244 342 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 SEMA6CQ9H3T2 930 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 EPB41L5Q9HCM4 733 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 IMP3Q9NV31 184 aaKnown RBP18.04■□□□□ 0.48
CPSF2-202ENST00000553427 CDC23Q9UJX2 597 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 SATB2Q9UPW6 733 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 VPS9D1Q9Y2B5 631 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 AK5Q9Y6K8 562 aa18.04■□□□□ 0.48
CPSF2-202ENST00000553427 PIKFYVEQ9Y2I7 2098 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 SLC5A10A0PJK1 596 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 KIF2AO00139 706 aaPredicted RBP18.03■□□□□ 0.48
CPSF2-202ENST00000553427 TP73O15350 636 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 ZZEF1O43149 2961 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 NDUFS3O75489 264 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 UBXN7O94888 489 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 TTC4O95801 387 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 MPOP05164 745 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 POLBP06746 335 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 HOXB3P14651 431 aaPredicted RBP18.03■□□□□ 0.48
CPSF2-202ENST00000553427 PGAM1P18669 254 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 CAPZBP47756 277 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 CKAP4Q07065 602 aaKnown RBP18.03■□□□□ 0.48
CPSF2-202ENST00000553427 C3orf38Q5JPI3 329 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 NEPROQ6NW34 567 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 RAB11FIP2Q7L804 512 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 LDB1Q86U70 411 aaPredicted RBP18.03■□□□□ 0.48
CPSF2-202ENST00000553427 PDZD3Q86UT5 571 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 CILP2Q8IUL8 1156 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 PDIK1LQ8N165 341 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 SPDYE1Q8NFV5 336 aaPredicted RBP18.03■□□□□ 0.48
CPSF2-202ENST00000553427 LPGAT1Q92604 370 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 LRRC39Q96DD0 335 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 TRIM56Q9BRZ2 755 aaKnown RBP18.03■□□□□ 0.48
CPSF2-202ENST00000553427 RAB33BQ9H082 229 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 KIR3DX1Q9H7L2 352 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 ASCL3Q9NQ33 180 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 OGFRQ9NZT2 677 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 FAM8A1Q9UBU6 413 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 GNPTGQ9UJJ9 305 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 MAD1L1Q9Y6D9 718 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 COLEC10Q9Y6Z7 277 aa18.03■□□□□ 0.48
CPSF2-202ENST00000553427 EFCAB8A8MWE9 144 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 IFRD1O00458 451 aaPredicted RBP18.02■□□□□ 0.48
CPSF2-202ENST00000553427 PLD2O14939 933 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 ITGA8P53708 1063 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 ERVPABLB-1P60509 514 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 DHX9Q08211 1270 aaKnown RBP18.02■□□□□ 0.48
CPSF2-202ENST00000553427 LONRF1Q17RB8 773 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 TBC1D25Q3MII6 688 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 PHF19Q5T6S3 580 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 PLXDC1Q8IUK5 500 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 OTUD6BQ8N6M0 293 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 BBOF1Q8ND07 529 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 SNIP1Q8TAD8 396 aaKnown RBP18.02■□□□□ 0.48
CPSF2-202ENST00000553427 ELMO1Q92556 727 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 TRIM44Q96DX7 344 aaPredicted RBP18.02■□□□□ 0.48
CPSF2-202ENST00000553427 CCDC74BQ96LY2 380 aa18.02■□□□□ 0.48
CPSF2-202ENST00000553427 ZNF578Q96N58 590 aaPredicted RBP18.02■□□□□ 0.48
CPSF2-202ENST00000553427 CMKLR1Q99788 373 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms