RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SLC36A4Q6YBV0 504 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 MON1BQ7L1V2 547 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 SIAH3Q8IW03 269 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 OR2AJ1Q8NGZ0 328 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 BCL2L2Q92843 193 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-208ENST00000553278 CENPTQ96BT3 561 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 MOB3AQ96BX8 217 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 C5orf30Q96GV9 206 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 SLC22A12Q96S37 553 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 KXD1Q9BQD3 176 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 FNDC11Q9BVV2 318 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 C1QTNF3Q9BXJ4 246 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 FAM234AQ9H0X4 552 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 MAP6D1Q9H9H5 199 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 LMAN1LQ9HAT1 526 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 SPG21Q9NZD8 308 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 HMG20BQ9P0W2 317 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 RCC2Q9P258 522 aaKnown RBP5.64□□□□□ -1.51
SCFD1-208ENST00000553278 ITM2BQ9Y287 266 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 PADI2Q9Y2J8 665 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 WDR17Q8IZU2 1322 aa5.64□□□□□ -1.51
SCFD1-208ENST00000553278 SLC9B1P1A6NJY1 282 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 A6NNC1 897 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 AP5Z1O43299 807 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 LUC7L3O95232 432 aaKnown RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 IGHDP01880 384 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 C8orf89P0DMQ9 161 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 CTSAP10619 480 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 CHRNB1P11230 501 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 VCLP18206 1134 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 UGT1A1P22309 533 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 STX2P32856 288 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 GPC3P51654 580 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 ADARP55265 1226 aaKnown RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 POLR2LP62875 67 aaKnown RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 TNK1Q13470 666 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 LAMB3Q13751 1172 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 SGCBQ16585 318 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 DUSP6Q16828 381 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 FAM174BQ3ZCQ3 159 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 AARDQ4LEZ3 155 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 TCTE1Q5JU00 501 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 FCRLBQ6BAA4 426 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 GALNT17Q6IS24 598 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 NHLRC1Q6VVB1 395 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 MEPCEQ7L2J0 689 aaKnown RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 ADCK1Q86TW2 530 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 FOXP4Q8IVH2 680 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 PM20D2Q8IYS1 436 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 PCDH20Q8N6Y1 951 aaKnown RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 MRPL43Q8N983 215 aaKnown RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 NEK11Q8NG66 645 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 B4GALNT2Q8NHY0 566 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 UBLCP1Q8WVY7 318 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 SLC13A3Q8WWT9 602 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 FAM81BQ96LP2 452 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 KLHL5Q96PQ7 755 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 C16orf70Q9BSU1 422 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 POLDIP3Q9BY77 421 aaKnown RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 HHATLQ9HCP6 504 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 NINJ2Q9NZG7 142 aa5.63□□□□□ -1.51
SCFD1-208ENST00000553278 ABT1Q9ULW3 272 aaKnown RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 RPH3AQ9Y2J0 694 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-208ENST00000553278 KCNU1A8MYU2 1149 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 FAM90A26D6RGX4 464 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 MDM4O15151 490 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 HSPA12AO43301 675 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 ZIC3O60481 467 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 ALPPP05187 535 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 SPP1P10451 314 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 ALPPL2P10696 532 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 MYL6BP14649 208 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 EPORP19235 508 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 CD22P20273 847 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 KCNA5P22460 613 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 CCND3P30281 292 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-208ENST00000553278 TAS2R38P59533 333 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 HTD2P86397 168 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 PDK1Q15118 436 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 IQCCQ4KMZ1 466 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 ASPHD1Q5U4P2 390 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 DCAF12L2Q5VW00 463 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 MFSD12Q6NUT3 480 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 SLC16A12Q6ZSM3 486 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 TOM1L2Q6ZVM7 507 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 NRROSQ86YC3 692 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 CCDC83Q8IWF9 413 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 SLC5A8Q8N695 610 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 TMEM174Q8WUU8 243 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 PRCCQ92733 491 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-208ENST00000553278 RIT1Q92963 219 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 SNRNP40Q96DI7 357 aaKnown RBP5.62□□□□□ -1.51
SCFD1-208ENST00000553278 STAMBPL1Q96FJ0 436 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 MMTAG2Q9BU76 263 aaKnown RBP5.62□□□□□ -1.51
SCFD1-208ENST00000553278 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 DPAGT1Q9H3H5 408 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 TSPY26PQ9H489 355 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 SRD5A3Q9H8P0 318 aa5.62□□□□□ -1.51
SCFD1-208ENST00000553278 C17orf75Q9HAS0 396 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms