RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SLC38A3Q99624 504 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 EBNA1BP2Q99848 306 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 WDR83Q9BRX9 315 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 WWP1Q9H0M0 922 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 P2RY12Q9H244 342 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 DPH5Q9H2P9 285 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 INTS10Q9NVR2 710 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 KCNK4Q9NYG8 393 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 GRHL1Q9NZI5 618 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 ZNF624Q9P2J8 865 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 FAM8A1Q9UBU6 413 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 PSMD13Q9UNM6 376 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 SNX24Q9Y343 169 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 TEX264Q9Y6I9 313 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 FAM169AQ9Y6X4 670 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 ACACAQ13085 2346 aa11.47□□□□□ -0.57
TRAFD1-209ENST00000552896 ANKRD11Q6UB99 2663 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 TRBV23OR9-2A0A075B6M9 112 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 GOLGA8KD6RF30 607 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 H3BMM5 538 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 GOLGA8TH3BQL2 631 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 CASC3O15234 703 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 CPNE6O95741 557 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 VIPP01282 170 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 ALDH4A1P30038 563 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 CCKBRP32239 447 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 CSF2RBP32927 897 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 SLC19A1P41440 591 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 OR1D5P58170 312 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 MRPS25P82663 173 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 PLOD1Q02809 727 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 CAV1Q03135 178 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 TARDBPQ13148 414 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 SQSTM1Q13501 440 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 THOC5Q13769 683 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 FRG1Q14331 258 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 RPE65Q16518 533 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 ISXQ2M1V0 245 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 STEAP4Q687X5 459 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 ZNF449Q6P9G9 518 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 TMEM26Q6ZUK4 368 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 LDB1Q86U70 411 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 PDZD3Q86UT5 571 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 KCNMB4Q86W47 210 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 MMGT1Q8N4V1 131 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 LILRA3Q8N6C8 439 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 OR10G6Q8NH81 332 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 GABPB2Q8TAK5 448 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 ELMO1Q92556 727 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 NXPE2Q96DL1 559 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 C12orf66Q96MD2 445 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 TMEM74Q96NL1 305 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 PANX3Q96QZ0 392 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 DPYSL5Q9BPU6 564 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 CARD6Q9BX69 1037 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 TMEM121BQ9BXQ6 578 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 OR52A5Q9H2C5 316 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 EPB41L5Q9HCM4 733 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 SLC40A1Q9NP59 571 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 C20orf96Q9NUD7 363 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 IL1RAPL1Q9NZN1 696 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 ZC3H7BQ9UGR2 993 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 CHMP2BQ9UQN3 213 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 PCDHB1Q9Y5F3 818 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 HEBP2Q9Y5Z4 205 aa11.46□□□□□ -0.57
TRAFD1-209ENST00000552896 APC2O95996 2303 aa11.46□□□□□ -0.58
TRAFD1-209ENST00000552896 ANKRD12Q6UB98 2062 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 DMXL2Q8TDJ6 3036 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 MN1Q10571 1320 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 UBA6A0AVT1 1052 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CTAGE15A4D2H0 777 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 TMX2-CTNND1H3BSU7 103 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 IFRD1O00458 451 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 EIF3HO15372 352 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 B4GAT1O43505 415 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 ESR1P03372 595 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CTAGE8P0CG41 777 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 NDUFS1P28331 727 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CD1CP29017 333 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 ELK3P41970 407 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 SLC1A2P43004 574 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 PREPP48147 710 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CD151P48509 253 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 EIF3BP55884 814 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 BOP1Q14137 746 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 GPR18Q14330 331 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 TMED2Q15363 201 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CTSL3PQ5NE16 218 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 PTRHD1Q6GMV3 140 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CAPRIN2Q6IMN6 1127 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 WDR74Q6RFH5 385 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 UNC5AQ6ZN44 842 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CENPUQ71F23 418 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CTAGE6Q86UF2 777 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 ZNF761Q86XN6 746 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 IGDCC3Q8IVU1 814 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 SLITRK4Q8IW52 837 aa11.45□□□□□ -0.58
TRAFD1-209ENST00000552896 CNTN4Q8IWV2 1026 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms