RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 IRGCQ6NXR0 463 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 KLHL35Q6PF15 583 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 DARS2Q6PI48 645 aaKnown RBP11.59□□□□□ -0.55
CKAP4-202ENST00000552828 ZNF517Q6ZMY9 492 aaPredicted RBP11.59□□□□□ -0.55
CKAP4-202ENST00000552828 KMT5CQ86Y97 462 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 CDKL3Q8IVW4 592 aaPredicted RBP11.59□□□□□ -0.55
CKAP4-202ENST00000552828 GALNT11Q8NCW6 608 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 SPATA22Q8NHS9 363 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 THAP4Q8WY91 577 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 RNF31Q96EP0 1072 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 TEKT5Q96M29 485 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 TLR10Q9BXR5 811 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 CEP41Q9BYV8 373 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 TRABDQ9H4I3 376 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 ACTL8Q9H568 366 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 AKIRIN1Q9H9L7 192 aaPredicted RBP11.59□□□□□ -0.55
CKAP4-202ENST00000552828 GLOD4Q9HC38 313 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 IL26Q9NPH9 171 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 RARRES3Q9UL19 164 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 JRKLQ9Y4A0 524 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 DNMT3AQ9Y6K1 912 aaPredicted RBP11.59□□□□□ -0.55
CKAP4-202ENST00000552828 MYO9AB2RTY4 2548 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 CENPEQ02224 2701 aa11.59□□□□□ -0.55
CKAP4-202ENST00000552828 LOC285095A0A1B0GVY8 99 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 STK10O94804 968 aaKnown RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 MT-CYBP00156 380 aaPredicted RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 EPOP01588 193 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 RBL1P28749 1068 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 PTPN4P29074 926 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 HALP42357 657 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 PPP1CAP62136 330 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 ACY1Q03154 408 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 KLF1Q13351 362 aaPredicted RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 RPE65Q16518 533 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 PCSK7Q16549 785 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 ZDHHC20Q5W0Z9 365 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 CAPRIN2Q6IMN6 1127 aaKnown RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 CCDC70Q6NSX1 233 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 PID1Q7Z2X4 250 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 AMZ2Q86W34 360 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 SLC13A5Q86YT5 568 aaPredicted RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 TRAPPC5Q8IUR0 188 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 D2HGDHQ8N465 521 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 SIDT2Q8NBJ9 832 aaKnown RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 ZNF514Q96K75 400 aaPredicted RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 CD180Q99467 661 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 FAM118BQ9BPY3 351 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 TRIM55Q9BYV6 548 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 KLHL8Q9P2G9 620 aaPredicted RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 TRHDEQ9UKU6 1024 aa11.58□□□□□ -0.56
CKAP4-202ENST00000552828 PCDHGA9Q9Y5G4 932 aaKnown RBP11.58□□□□□ -0.56
CKAP4-202ENST00000552828 TCRBV7S2A1N4TA0A589 114 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 OR5K3A6NET4 321 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 ZNF500O60304 480 aaPredicted RBP11.57□□□□□ -0.56
CKAP4-202ENST00000552828 POP7O75817 140 aaKnown RBP11.57□□□□□ -0.56
CKAP4-202ENST00000552828 DNAJB5O75953 348 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 SLC4A1P02730 911 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 LPOP22079 712 aaPredicted RBP11.57□□□□□ -0.56
CKAP4-202ENST00000552828 TERF1P54274 439 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 TUBB4BP68371 445 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 HSD11B2P80365 405 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 TUBB2AQ13885 445 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 GTF2H3Q13889 308 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 KCNAB1Q14722 419 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 C4orf17Q53FE4 359 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 METRNLQ641Q3 311 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 FAM83HQ6ZRV2 1179 aaPredicted RBP11.57□□□□□ -0.56
CKAP4-202ENST00000552828 SYVN1Q86TM6 617 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 ZNF567Q8N184 647 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 CARFQ8N187 725 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 TTC30BQ8N4P2 665 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 RASGEF1AQ8N9B8 481 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 DDHD1Q8NEL9 900 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 GPR150Q8NGU9 434 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 OR8K5Q8NH50 307 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 ZFPM2Q8WW38 1151 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 RUFY1Q96T51 708 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 MAP3K3Q99759 626 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 TUBB2BQ9BVA1 445 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 FRMD8P1Q9BZ68 369 aaPredicted RBP11.57□□□□□ -0.56
CKAP4-202ENST00000552828 ZCCHC2Q9C0B9 1178 aaKnown RBP11.57□□□□□ -0.56
CKAP4-202ENST00000552828 C10orf88Q9H8K7 445 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 LRRC4CQ9HCJ2 640 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 BPIFA1Q9NP55 256 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 FGF21Q9NSA1 209 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 IL17CQ9P0M4 197 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 ITPR2Q14571 2701 aa11.57□□□□□ -0.56
CKAP4-202ENST00000552828 TLCD2A6NGC4 264 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 TTLL8A6PVC2 850 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 KCNN4O15554 427 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 CEP104O60308 925 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 VPS4BO75351 444 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 PMPCBO75439 489 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 CEACAM4O75871 244 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 SORBS2O94875 1100 aaKnown RBP11.56□□□□□ -0.56
CKAP4-202ENST00000552828 EBLN1P0CF75 366 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 CD68P34810 354 aaPredicted RBP11.56□□□□□ -0.56
CKAP4-202ENST00000552828 UQCRFS1P47985 274 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 PGDP52209 483 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms