RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 TFAP2CQ92754 450 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 EFHD2Q96C19 240 aaPredicted RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 RRNAD1Q96FB5 475 aaKnown RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 PGM2Q96G03 612 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 QRFPRQ96P65 431 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 LSG1Q9H089 658 aaKnown RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 CXorf36Q9H7Y0 433 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 KIF9Q9HAQ2 790 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 TMEM161AQ9NX61 479 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 IL20Q9NYY1 176 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 PLK2Q9NYY3 685 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 VSX1Q9NZR4 365 aaPredicted RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 KIAA1257Q9ULG3 409 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 MRPS17Q9Y2R5 130 aaKnown RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 A0A075B6Q4 140 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 HSBP1L1C9JCN9 74 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 USP17L23D6RBM5 183 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 GOLGA8SH3BPF8 625 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 TLR4O00206 839 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 PRRG1O14668 218 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 HS3ST1O14792 307 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 ECI2O75521 394 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CSF1RP07333 972 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 IVLP07476 585 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 UQCRFS1P1P0C7P4 283 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CD72P21854 359 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CYP2F1P24903 491 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 TIA1P31483 386 aaKnown RBP eCLIP4.14□□□□□ -1.75
USP44-208ENST00000552440 UQCRC1P31930 480 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CDAP32320 146 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 RPS6KA3P51812 740 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CDH13P55290 713 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 LOXL3P58215 753 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 ECT2LQ008S8 904 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 TIAL1Q01085 375 aaKnown RBP eCLIP4.14□□□□□ -1.75
USP44-208ENST00000552440 SEMA3BQ13214 749 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CUL1Q13616 776 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 RIN1Q13671 783 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 DHX34Q14147 1143 aaKnown RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 IL13RA2Q14627 380 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 PTPRCAPQ14761 206 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 VEPH1Q14D04 833 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 ZRSR1Q15695 479 aaKnown RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 NAB2Q15742 525 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 MAPK11Q15759 364 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CDO1Q16878 200 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 SMTNL2Q2TAL5 461 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 AP5B1Q2VPB7 878 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 USH1GQ495M9 461 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 SLC36A3Q495N2 470 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CERCAMQ5T4B2 595 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 TXNDC8Q6A555 127 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 IGFL4Q6B9Z1 124 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 TMEM211Q6ICI0 200 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CASC4Q6P4E1 433 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 C16orf89Q6UX73 402 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 RANBP10Q6VN20 620 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 MTERF4Q7Z6M4 381 aaKnown RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 RTN4RL2Q86UN3 420 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 LDLRAD3Q86YD5 345 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CD302Q8IX05 232 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 ARFGAP2Q8N6H7 521 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 BEND2Q8NDZ0 799 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 TMEM185AQ8NFB2 350 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 OR9A1PQ8NGU1 263 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 OR10T2Q8NGX3 314 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 FAM110DQ8TAY7 271 aaPredicted RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 GPT2Q8TD30 523 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 SLC20A1Q8WUM9 679 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 DNAJA4Q8WW22 397 aaPredicted RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 CKAP2Q8WWK9 683 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 STARD8Q92502 1023 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 AZIN2Q96A70 460 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 SPSB1Q96BD6 273 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 BSCL2Q96G97 398 aaPredicted RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 LRRC3BQ96PB8 259 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 SMOQ99835 787 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 SH3GL1Q99961 368 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 CDK19Q9BWU1 502 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 DDX47Q9H0S4 455 aaKnown RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 SRD5A3Q9H8P0 318 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 AGO3Q9H9G7 860 aaKnown RBP4.14□□□□□ -1.75
USP44-208ENST00000552440 KCNK13Q9HB14 408 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 GLOD4Q9HC38 313 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 AGPAT3Q9NRZ7 376 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 SLC22A11Q9NSA0 550 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 PAG1Q9NWQ8 432 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 BABAM1Q9NWV8 329 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 BARHL2Q9NY43 387 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 OR6C3Q9NZP0 311 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 AP4B1Q9Y6B7 739 aa4.14□□□□□ -1.75
USP44-208ENST00000552440 GAKO14976 1311 aa4.13□□□□□ -1.75
USP44-208ENST00000552440 SPATA31A3Q5VYP0 1347 aa4.13□□□□□ -1.75
USP44-208ENST00000552440 NCAPD2Q15021 1401 aa4.13□□□□□ -1.75
USP44-208ENST00000552440 ARAP1Q96P48 1450 aa4.13□□□□□ -1.75
USP44-208ENST00000552440 A0A1W2PPM1 405 aa4.13□□□□□ -1.75
USP44-208ENST00000552440 DRGXA6NNA5 263 aa4.13□□□□□ -1.75
USP44-208ENST00000552440 LGALS8O00214 317 aa4.13□□□□□ -1.75
USP44-208ENST00000552440 CHADO15335 359 aa4.13□□□□□ -1.75
USP44-208ENST00000552440 HBP1O60381 514 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms