RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 OR4D9Q8NGE8 314 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 NCSTNQ92542 709 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 ZNF592Q92610 1267 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 RMDN2Q96LZ7 410 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 SLC40A1Q9NP59 571 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 GNPTGQ9UJJ9 305 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 HEBP2Q9Y5Z4 205 aa18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 KMT2BQ9UMN6 2715 aaPredicted RBP18.08■□□□□ 0.48
PRPF40B-216ENST00000552301 ACACAQ13085 2346 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 FAM187AA6NFU0 413 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 GOLGA8KD6RF30 607 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 GOLGA8TH3BQL2 631 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 KIF2AO00139 706 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 BRINP1O60477 761 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 URI1O94763 535 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 USP1O94782 785 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 UBXN7O94888 489 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 JMJD7P0C870 316 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 PGAM1P18669 254 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 OGNP20774 298 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 ARNTP27540 789 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 NDUFS1P28331 727 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 PREPP48147 710 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 ZFP36L1Q07352 338 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 SQSTM1Q13501 440 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 GPR18Q14330 331 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 BBS9Q3SYG4 887 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 NEPROQ6NW34 567 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 TMEM71Q6P5X7 295 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 KLHL35Q6PF15 583 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 RAB11FIP2Q7L804 512 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 LRRC6Q86X45 466 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 FBXO39Q8N4B4 442 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 KDF1Q8NAX2 398 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 BBOF1Q8ND07 529 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 SPDYE1Q8NFV5 336 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 GPR150Q8NGU9 434 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 TMEM159Q96B96 161 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 CCDC74BQ96LY2 380 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 INSM2Q96T92 566 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 CMKLR1Q99788 373 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 SEMA6CQ9H3T2 930 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 DKK4Q9UBT3 224 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 VPS9D1Q9Y2B5 631 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 LOXL2Q9Y4K0 774 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 COLEC10Q9Y6Z7 277 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 KIF26BQ2KJY2 2108 aa18.07■□□□□ 0.48
PRPF40B-216ENST00000552301 AGRPO00253 132 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 PLD2O14939 933 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 SEC31AO94979 1220 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 TUBB4AP04350 444 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 TYRP1P17643 537 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 ITGB6P18564 788 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 IVDP26440 423 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 LIMK2P53671 638 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 ITGA8P53708 1063 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 EIF3BP55884 814 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 ARL4CP56559 192 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 PLOD1Q02809 727 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 DHX9Q08211 1270 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 TRA2AQ13595 282 aaKnown RBP eCLIP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 BRD3Q15059 726 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 TMED2Q15363 201 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 SNAP47Q5SQN1 464 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 DUS1LQ6P1R4 473 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 WDR74Q6RFH5 385 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 TMPRSS9Q7Z410 1059 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 TMEM135Q86UB9 458 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 PLXDC1Q8IUK5 500 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 GABPB2Q8TAK5 448 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 CALML6Q8TD86 181 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 SIGLEC10Q96LC7 697 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 PANX3Q96QZ0 392 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 TCF12Q99081 682 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 TRIM56Q9BRZ2 755 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 NAT9Q9BTE0 207 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 PCDHGA8Q9Y5G5 932 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 APC2O95996 2303 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 EPG5Q9HCE0 2579 aa18.06■□□□□ 0.48
PRPF40B-216ENST00000552301 PRAMEF33A0A0G2JMD5 474 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 IGHV5-10-1A0A0J9YXX1 117 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 HGSO14964 777 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 TTC4O95801 387 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 THRAP10827 490 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 HOXB3P14651 431 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 MPSTP25325 297 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 ARCN1P48444 511 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 CD151P48509 253 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 CALCOCO2Q13137 446 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 HIF1AQ16665 826 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 LONRF1Q17RB8 773 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 TYSND1Q2T9J0 566 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 ZNF470Q6ECI4 717 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 CAPRIN2Q6IMN6 1127 aaKnown RBP18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 HIBCHQ6NVY1 386 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 PDZD3Q86UT5 571 aa18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 FCRL3Q96P31 734 aaPredicted RBP18.05■□□□□ 0.48
PRPF40B-216ENST00000552301 CARD6Q9BX69 1037 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms