RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ATP5F1P24539 256 aaPredicted RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 ARHGAP25P42331 645 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 PSMC4P43686 418 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 CRKLP46109 303 aaKnown RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 FOXF2Q12947 444 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 LEXMQ3ZCV2 418 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 CEP78Q5JTW2 689 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 CRIP3Q6Q6R5 217 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 PET117Q6UWS5 81 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 SLC16A12Q6ZSM3 486 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 TAOK1Q7L7X3 1001 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 PATL1Q86TB9 770 aaKnown RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 ANKRD13BQ86YJ7 626 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 GPSM1Q86YR5 675 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 DCLK2Q8N568 766 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 TEKT4Q8WW24 435 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 LPGAT1Q92604 370 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 CITED2Q99967 270 aaPredicted RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 MMP27Q9H306 513 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 EPB41L5Q9HCM4 733 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 CHMP1AQ9HD42 196 aaPredicted RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 ABCF3Q9NUQ8 709 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 GDE1Q9NZC3 331 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 ZNF112Q9UJU3 913 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 DBNLQ9UJU6 430 aaKnown RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 OSGIN1Q9UJX0 560 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 CLIC4Q9Y696 253 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 DMXL2Q8TDJ6 3036 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 KANSL1LA0AUZ9 987 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 LNP1A1A4G5 178 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 ARHGEF37A1IGU5 675 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 ATP5BP06576 529 aaKnown RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 G6PDP11413 515 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 VPREB1P12018 145 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 IFNAR1P17181 557 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 CHRNB2P17787 502 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 UBA1P22314 1058 aaKnown RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 ACADLP28330 430 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 HOXC9P31274 260 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 PIGAP37287 484 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 RBP5P82980 135 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 PPP2R2BQ00005 443 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 RALGDSQ12967 914 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 IL11RAQ14626 422 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 ZNF805Q5CZA5 627 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 DHRS7BQ6IAN0 325 aaPredicted RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 PLEKHA7Q6IQ23 1121 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 MFSD6Q6ZSS7 791 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 MON1BQ7L1V2 547 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 CAMKMTQ7Z624 323 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 ADCK2Q7Z695 626 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 CCDC91Q7Z6B0 441 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 CCDC190Q86UF4 302 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 IQCHQ86VS3 1027 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 DSELQ8IZU8 1212 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 MMP21Q8N119 569 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 TMCO5AQ8N6Q1 288 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 TC2NQ8N9U0 490 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 TEX45Q8NA69 505 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 BICD2Q8TD16 824 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 DEPDC1BQ8WUY9 529 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 HDAC11Q96DB2 347 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 CFAP57Q96MR6 1250 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 SPAG5Q96R06 1193 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 WDR77Q9BQA1 342 aaPredicted RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 NAA11Q9BSU3 229 aaPredicted RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 DESI2Q9BSY9 194 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 THUMPD3Q9BV44 507 aaKnown RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 SPATC1LQ9H0A9 340 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 GOLPH3LQ9H4A5 285 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 KLHL31Q9H511 634 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 RIOX1Q9H6W3 641 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 MKKSQ9NPJ1 570 aaPredicted RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 ACSS1Q9NUB1 689 aaPredicted RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 MSRB1Q9NZV6 116 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
CPSF6-206ENST00000550987 TUBE1Q9UJT0 475 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 BTBD3Q9Y2F9 522 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 MYRFQ9Y2G1 1151 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 PCDHGA5Q9Y5G8 931 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 STON1Q9Y6Q2 735 aa5.29□□□□□ -1.56
CPSF6-206ENST00000550987 SMIM35A0A1B0GVV1 85 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 TMEM8BA6NDV4 472 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 SMAD9O15198 467 aaKnown RBP5.28□□□□□ -1.56
CPSF6-206ENST00000550987 ITM2AO43736 263 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 TGDSO95455 350 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 KLKB1P03952 638 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 ICAM1P05362 532 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 CYC1P08574 325 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 C6P13671 934 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 MC5RP33032 325 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 GP5P40197 560 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 MMP14P50281 582 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 RAB28P51157 221 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 FHL2Q14192 279 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 MYBPC2Q14324 1141 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 ARMC4Q5T2S8 1044 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 ZNF788Q6ZQV5 615 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 MTSS1LQ765P7 747 aa5.28□□□□□ -1.56
CPSF6-206ENST00000550987 TSPAN33Q86UF1 283 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms