RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 FAM90A14PP0C7W9 464 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 PEPDP12955 493 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 TGM2P21980 687 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 CHMLP26374 656 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 HOXD9P28356 352 aaPredicted RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 PTGER1P34995 402 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 GRK6P43250 576 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 SOX2P48431 317 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 RPL10AP62906 217 aaKnown RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 BNC1Q01954 994 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 GPR17Q13304 367 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 KRT72Q14CN4 511 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 RABEP1Q15276 862 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 EARS2Q5JPH6 523 aaKnown RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 LIPMQ5VYY2 423 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 DEF8Q6ZN54 512 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 FAM57BQ71RH2 274 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 TMPRSS12Q86WS5 348 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 SLC44A2Q8IWA5 706 aaPredicted RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 DHX40Q8IX18 779 aaKnown RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 CACNA2D3Q8IZS8 1091 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 BLIDQ8IZY5 108 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 FAM47BQ8NA70 645 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 OR1N1Q8NGS0 311 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 C16orf52Q8NHV5 167 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 CCDC26Q8TAB7 109 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 BCAS4Q8TDM0 211 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 ZFPM2Q8WW38 1151 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 CPT1BQ92523 772 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 C3orf49Q96BT1 292 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 BICD1Q96G01 975 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 PYM1Q9BRP8 204 aaKnown RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 TRIM9Q9C026 710 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 SPRTNQ9H040 489 aaPredicted RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 C2orf40Q9H1Z8 148 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 SYNDIG1Q9H7V2 258 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 RPF1Q9H9Y2 349 aaKnown RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 MOV10Q9HCE1 1003 aaKnown RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 C19orf53Q9UNZ5 99 aaPredicted RBP4.34□□□□□ -1.71
CBX5-203ENST00000547872 CPQQ9Y646 472 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 STK36Q9NRP7 1315 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 NID2Q14112 1375 aa4.34□□□□□ -1.71
CBX5-203ENST00000547872 HECTD1Q9ULT8 2610 aa4.34□□□□□ -1.72
CBX5-203ENST00000547872 MYLKQ15746 1914 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 DENND4CQ5VZ89 1909 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 PLXNA2O75051 1894 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 A0A1W2PQF6 199 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 MBD3L5A6NJ08 208 aaPredicted RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 KCNJ18B7U540 433 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 NEDD8-MDP1E9PL57 170 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 CCER2I3L3R5 266 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 HCRTO43612 131 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 SDC3O75056 442 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 RTN2O75298 545 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 ZNF217O75362 1048 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 SLITRK3O94933 977 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 BAG4O95429 457 aaKnown RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 RFPL3SP0C7P2 107 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 HAPLN1P10915 354 aaPredicted RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 MBL2P11226 248 aaPredicted RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 ACADMP11310 421 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 HMGA1P17096 107 aaKnown RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 CYP2F1P24903 491 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 CHKAP35790 457 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 CCR10P46092 362 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 TRAPPC10P48553 1259 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 TUFMP49411 452 aaKnown RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 PEX3P56589 373 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 C21orf59P57076 290 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 FAM3BP58499 235 aaPredicted RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 ZXDBP98169 803 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 SRSF6Q13247 344 aaKnown RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 ADCK5Q3MIX3 580 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 TBRG1Q3YBR2 411 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 KCNT1Q5JUK3 1230 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 SPDYCQ5MJ68 293 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 TTC22Q5TAA0 569 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 PAPD7Q5XG87 772 aaKnown RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 ZNF425Q6IV72 752 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 LIN54Q6MZP7 749 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 IL27RAQ6UWB1 636 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 TPGS1Q6ZTW0 290 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 C1QL2Q7Z5L3 287 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 MON1AQ86VX9 555 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 METTL23Q86XA0 190 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 EXD3Q8N9H8 876 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 BEST2Q8NFU1 509 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 SCAMP5Q8TAC9 235 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 LRRC15Q8TF66 581 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 NOC3LQ8WTT2 800 aaKnown RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 SCFD1Q8WVM8 642 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 COQ8BQ96D53 544 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 VCPIP1Q96JH7 1222 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 IFT74Q96LB3 600 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 SENP8Q96LD8 212 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 TUBB6Q9BUF5 446 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 GATA5Q9BWX5 397 aaPredicted RBP4.33□□□□□ -1.72
CBX5-203ENST00000547872 NFKBIZQ9BYH8 718 aa4.33□□□□□ -1.72
CBX5-203ENST00000547872 MAGEH1Q9H213 219 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms