RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 OR52Z1P0C646 297 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 UROSP10746 265 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ST6GAL1P15907 406 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ADRA2CP18825 462 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 TACR3P29371 465 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 CDC25AP30304 524 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 GPC3P51654 580 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 NAGLUP54802 743 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 STARD6P59095 220 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ST8SIA6P61647 398 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 HMGN5P82970 282 aaKnown RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ACSM1Q08AH1 577 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 SREBF2Q12772 1141 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 SOWAHAQ2M3V2 549 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 KBTBD12Q3ZCT8 623 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 FAM98BQ52LJ0 330 aaKnown RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ESCO2Q56NI9 601 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 MDH1BQ5I0G3 518 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 C6orf136Q5SQH8 315 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 NCAPH2Q6IBW4 605 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ZBTB49Q6ZSB9 765 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 INTS8Q75QN2 995 aaKnown RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 DPPA4Q7L190 304 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ABI3BPQ7Z7G0 1075 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 PARP16Q8N5Y8 322 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ST7LQ8TDW4 575 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ZFAND2BQ8WV99 257 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 N4BP2L2Q92802 583 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 DNASE1L2Q92874 299 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 EXT2Q93063 718 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 SPSB1Q96BD6 273 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ERLEC1Q96DZ1 483 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF419Q96HQ0 510 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF570Q96NI8 536 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 NEK1Q96PY6 1258 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 GAL3ST4Q96RP7 486 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 DDOQ99489 341 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 PARK7Q99497 189 aaKnown RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 ZPBPQ9BS86 351 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 PIGMQ9H3S5 423 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 DNAJC17Q9NVM6 304 aaKnown RBP4.2□□□□□ -1.74
SCAF11-210ENST00000547654 VPS18Q9P253 973 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 NDRG3Q9UGV2 375 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 APPL1Q9UKG1 709 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 STX8Q9UNK0 236 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 RABL2BQ9UNT1 228 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 PCDHGA5Q9Y5G8 931 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 CLIC4Q9Y696 253 aa4.2□□□□□ -1.74
SCAF11-210ENST00000547654 C17orf102A2RUQ5 167 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 SMIM30A4D0T7 59 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 DPPA5A6NC42 116 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 YDJCA8MPS7 323 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 ERVV-2B6SEH9 535 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 VCYO14598 125 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 SLC30A4O14863 429 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 SMAD9O15198 467 aaKnown RBP4.19□□□□□ -1.74
SCAF11-210ENST00000547654 EPN2O95208 641 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 LCKP06239 509 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 MMP2P08253 660 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 ITIH1P19827 911 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 CDC25CP30307 473 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 HOXC9P31274 260 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 CTNNB1P35222 781 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 KHKP50053 298 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 LIMK1P53667 647 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 NME5P56597 212 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 UBASH3AP57075 661 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 KIAA1024LP59773 190 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 VWC2Q2TAL6 325 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 ODF3L2Q3SX64 289 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 PRAMEF19Q5SWL8 479 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 HEPHL1Q6MZM0 1159 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 CASC4Q6P4E1 433 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 AAGABQ6PD74 315 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 TEX38Q6PEX7 206 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 OLFM4Q6UX06 510 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 PQLC2Q6ZP29 291 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 LINGO2Q7L985 606 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 MIER3Q7Z3K6 550 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 SERPINA11Q86U17 422 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 CCDC190Q86UF4 302 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 ADIPOR2Q86V24 386 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 TMEM173Q86WV6 379 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-210ENST00000547654 DENND6AQ8IWF6 608 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 C4orf19Q8IY42 314 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 DCP1BQ8IZD4 617 aaKnown RBP4.19□□□□□ -1.74
SCAF11-210ENST00000547654 C9orf43Q8TAL5 461 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-210ENST00000547654 SYAP1Q96A49 352 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-210ENST00000547654 MIB2Q96AX9 1013 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 MS4A10Q96PG2 267 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 SMC6Q96SB8 1091 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 SEPHS2Q99611 448 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 HNRNPABQ99729 332 aaKnown RBP4.19□□□□□ -1.74
SCAF11-210ENST00000547654 ABHD6Q9BV23 337 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 KATNB1Q9BVA0 655 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 SCNM1Q9BWG6 230 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 CDT1Q9H211 546 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF304Q9HCX3 659 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 GPR108Q9NPR9 543 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 MTMR10Q9NXD2 777 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms