RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SPANXN4Q5MJ08 99 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 GPR153Q6NV75 609 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 CYS1Q717R9 158 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 THAP5Q7Z6K1 395 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 RBM23Q86U06 439 aaKnown RBP14.46□□□□□ -0.09
HOXC11-202ENST00000546378 ZFYVE19Q96K21 471 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 ACTR8Q9H981 624 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 HMX1Q9NP08 348 aaPredicted RBP14.46□□□□□ -0.09
HOXC11-202ENST00000546378 STARD7Q9NQZ5 370 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 VAPAQ9P0L0 249 aa14.46□□□□□ -0.09
HOXC11-202ENST00000546378 TRMT6Q9UJA5 497 aaKnown RBP14.46□□□□□ -0.09
HOXC11-202ENST00000546378 MUSKO15146 869 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 CLPXO76031 633 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 PFKLP17858 780 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 MYF6P23409 242 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 SERPINB1P30740 379 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 ACLYP53396 1101 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 SF3B4Q15427 424 aaKnown RBP eCLIP14.46□□□□□ -0.1
HOXC11-202ENST00000546378 GPSM1Q86YR5 675 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 DCP1BQ8IZD4 617 aaKnown RBP14.46□□□□□ -0.1
HOXC11-202ENST00000546378 OR4L1Q8NH43 312 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 IGSF8Q969P0 613 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 TMEM125Q96AQ2 219 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 MAGED4Q96JG8 741 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 FAR2Q96K12 515 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 MYRFLQ96LU7 910 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 DPH2Q9BQC3 489 aaPredicted RBP14.46□□□□□ -0.1
HOXC11-202ENST00000546378 IKZF5Q9H5V7 419 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 CNGB3Q9NQW8 809 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 C14orf119Q9NWQ9 140 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 ACTR3BQ9P1U1 418 aa14.46□□□□□ -0.1
HOXC11-202ENST00000546378 ARID2Q68CP9 1835 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 RAMP2O60895 175 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 FAM20BO75063 409 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 ADAMTS4O75173 837 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 SERPINB7O75635 380 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 BMP10O95393 424 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 LCKP06239 509 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 BMP2P12643 396 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 CD1DP15813 335 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 CLCN5P51795 746 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 RPS24P62847 133 aaKnown RBP14.45□□□□□ -0.1
HOXC11-202ENST00000546378 RAD51Q06609 339 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 HERC3Q15034 1050 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 CCDC85BQ15834 202 aaPredicted RBP14.45□□□□□ -0.1
HOXC11-202ENST00000546378 MYEOVQ96EZ4 313 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 NODALQ96S42 347 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 NEURL2Q9BR09 285 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 ZBED2Q9BTP6 218 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 NSUN3Q9H649 340 aaKnown RBP14.45□□□□□ -0.1
HOXC11-202ENST00000546378 PALMDQ9NP74 551 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 TLR9Q9NR96 1032 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 FAM105AQ9NUU6 356 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 GMIPQ9P107 970 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 Q9Y3F1 56 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 PTCH2Q9Y6C5 1203 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 ARL5CA6NH57 179 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 SNAP91O60641 907 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 SERPINA1P01009 418 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 OPN1SWP03999 348 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 MRPS15P82914 257 aaKnown RBP14.45□□□□□ -0.1
HOXC11-202ENST00000546378 PRKG2Q13237 762 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 TAB1Q15750 504 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 DCLRE1AQ6PJP8 1040 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 FAM151BQ6UXP7 276 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 PIANPQ8IYJ0 282 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 ANKFN1Q8N957 763 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 LMNTD1Q8N9Z9 388 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 PCSK9Q8NBP7 692 aaKnown RBP14.45□□□□□ -0.1
HOXC11-202ENST00000546378 KLHDC9Q8NEP7 349 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 CCDC126Q96EE4 140 aa14.45□□□□□ -0.1
HOXC11-202ENST00000546378 OAS3Q9Y6K5 1087 aaKnown RBP14.45□□□□□ -0.1
HOXC11-202ENST00000546378 ACOX3O15254 700 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 ANGPTL1O95841 491 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 F9P00740 461 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 RENBPP51606 427 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 KCNQ1P51787 676 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 MAPKAPK3Q16644 382 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 CTU2Q2VPK5 515 aaKnown RBP14.44□□□□□ -0.1
HOXC11-202ENST00000546378 UBXN11Q5T124 520 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 PSAPL1Q6NUJ1 521 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 CADM3Q8N126 398 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 SLC47A1Q96FL8 570 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 FCRL5Q96RD9 977 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 PRDM5Q9NQX1 630 aaPredicted RBP14.44□□□□□ -0.1
HOXC11-202ENST00000546378 OSER1Q9NX31 292 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 TAS2R13Q9NYV9 303 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 PSME2Q9UL46 239 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 PRKAB1Q9Y478 270 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 RASAL1O95294 804 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 GLUD1P00367 558 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 HRH2P25021 359 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 CD97P48960 835 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 TBX4P57082 545 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 RAPSNQ13702 412 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 SULT1C3Q6IMI6 304 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 RANBP10Q6VN20 620 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 GPRIN3Q6ZVF9 776 aa14.44□□□□□ -0.1
HOXC11-202ENST00000546378 VTCN1Q7Z7D3 282 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms