RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PATE1Q8WXA2 126 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 IFT81Q8WYA0 676 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 ART4Q93070 314 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 CERS2Q96G23 380 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
CD9-211ENST00000546073 FERD3LQ96RJ6 166 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 SCNM1Q9BWG6 230 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 PHACTR1Q9C0D0 580 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 UCK1Q9HA47 277 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 MARCH4Q9P2E8 410 aaPredicted RBP17.13■□□□□ 0.33
CD9-211ENST00000546073 FBXO5Q9UKT4 447 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 CRYL1Q9Y2S2 319 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 PCYT1BQ9Y5K3 369 aaPredicted RBP17.13■□□□□ 0.33
CD9-211ENST00000546073 U3KQA8 63 aa17.13■□□□□ 0.33
CD9-211ENST00000546073 ZCWPW2A0A1B0GU75 182 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 DKK1O94907 266 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 GSTA2P09210 222 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 MTHFD1P11586 935 aaKnown RBP17.12■□□□□ 0.33
CD9-211ENST00000546073 PKMP14618 531 aaKnown RBP17.12■□□□□ 0.33
CD9-211ENST00000546073 ADARP55265 1226 aaKnown RBP17.12■□□□□ 0.33
CD9-211ENST00000546073 OR1D5P58170 312 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 HSPA14Q0VDF9 509 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 RPE65Q16518 533 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 TYSND1Q2T9J0 566 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 PLXDC1Q8IUK5 500 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 MVB12BQ9H7P6 319 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 POLG2Q9UHN1 485 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 ST14Q9Y5Y6 855 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 TEX264Q9Y6I9 313 aa17.12■□□□□ 0.33
CD9-211ENST00000546073 TP53BP1Q12888 1972 aaPredicted RBP17.11■□□□□ 0.33
CD9-211ENST00000546073 A6NCN8 305 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 PABPN1LA6NDY0 278 aaKnown RBP17.11■□□□□ 0.33
CD9-211ENST00000546073 OR52A4PA6NMU1 304 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 ESPNB1AK53 854 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 PPM1DO15297 605 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 MAP3K7O43318 606 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 VPS26AO75436 327 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 ERVK-10P10266 1014 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 PHBP35232 272 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 SLC19A1P41440 591 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 CARSP49589 748 aaKnown RBP17.11■□□□□ 0.33
CD9-211ENST00000546073 INHBCP55103 352 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 MGAT5Q09328 741 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 PRKAA1Q13131 559 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 TARDBPQ13148 414 aaKnown RBP eCLIP17.11■□□□□ 0.33
CD9-211ENST00000546073 CTBP1Q13363 440 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 SEMA3AQ14563 771 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 MSS51Q4VC12 460 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 UNC5AQ6ZN44 842 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 TMEM26Q6ZUK4 368 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 ZNF438Q7Z4V0 828 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 MAGEC3Q8TD91 643 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 NCSTNQ92542 709 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 TFGQ92734 400 aaPredicted RBP17.11■□□□□ 0.33
CD9-211ENST00000546073 ASF1AQ9Y294 204 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 PRSS21Q9Y6M0 314 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 LAMA1P25391 3075 aa17.11■□□□□ 0.33
CD9-211ENST00000546073 CFAP54Q96N23 3096 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 MED19A0JLT2 244 aaPredicted RBP17.1■□□□□ 0.33
CD9-211ENST00000546073 LILRA5A6NI73 299 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 E7ESA3 106 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 CSO75390 466 aaKnown RBP17.1■□□□□ 0.33
CD9-211ENST00000546073 BANF1O75531 89 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 SPAG6O75602 509 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 UBXN7O94888 489 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 EML2O95834 649 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 CSE1LP55060 971 aaKnown RBP17.1■□□□□ 0.33
CD9-211ENST00000546073 UBE2IP63279 158 aaKnown RBP17.1■□□□□ 0.33
CD9-211ENST00000546073 SHC2P98077 582 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 CUL1Q13616 776 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 NR1D2Q14995 579 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 CLCA4Q14CN2 919 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 PLEKHS1Q5SXH7 462 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.1■□□□□ 0.33
CD9-211ENST00000546073 PHF19Q5T6S3 580 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 FAM83HQ6ZRV2 1179 aaPredicted RBP17.1■□□□□ 0.33
CD9-211ENST00000546073 USP53Q70EK8 1073 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 FBXO25Q8TCJ0 367 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 NAT14Q8WUY8 206 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 LPGAT1Q92604 370 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 ZDHHC12Q96GR4 267 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 PWWP2AQ96N64 755 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 TRIT1Q9H3H1 467 aaKnown RBP17.1■□□□□ 0.33
CD9-211ENST00000546073 SLC40A1Q9NP59 571 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 FBXO6Q9NRD1 293 aaPredicted RBP17.1■□□□□ 0.33
CD9-211ENST00000546073 MSRB2Q9Y3D2 182 aa17.1■□□□□ 0.33
CD9-211ENST00000546073 IGHV1OR21-1A0A087WYE8 117 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 SGTAO43765 313 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 ZNF500O60304 480 aaPredicted RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 PROS1P07225 676 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 ARNTP27540 789 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 STX2P32856 288 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 SKIV2L2P42285 1042 aaKnown RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 SLC1A2P43004 574 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 PREPP48147 710 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 SLC12A2P55011 1212 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 EIF3IQ13347 325 aaKnown RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 FRG1Q14331 258 aaKnown RBP17.09■□□□□ 0.33
CD9-211ENST00000546073 CAPN12Q6ZSI9 719 aa17.09■□□□□ 0.33
CD9-211ENST00000546073 C3orf62Q6ZUJ4 267 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms