RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 PRIM2P49643 509 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MLLT10P55197 1068 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 IFITM3Q01628 133 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 PTSQ03393 145 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 PPP3CAQ08209 521 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 NME3Q13232 169 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 POU6F1Q14863 301 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ODF1Q14990 250 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 PCLAFQ15004 111 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ATP6AP1Q15904 470 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 UBE2SQ16763 222 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MTX3Q5HYI7 312 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 C1orf220Q5T0J3 134 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 HMBOX1Q6NT76 420 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MFSD7Q6UXD7 560 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 BBS12Q6ZW61 710 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 UBE3DQ7Z6J8 389 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CDR2LQ86X02 465 aaPredicted RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SNX32Q86XE0 403 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CPNE9Q8IYJ1 553 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ELMOD2Q8IZ81 293 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ZCCHC7Q8N3Z6 543 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 DEFB124Q8NES8 71 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 LRTOMTQ8WZ04 291 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SNX19Q92543 992 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ATP6V1E2Q96A05 226 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SLCO4A1Q96BD0 722 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 HDAC11Q96DB2 347 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 NT5C1BQ96P26 610 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SH2D3AQ9BRG2 576 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SLC7A5P2Q9GIP4 190 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 NAA50Q9GZZ1 169 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TM9SF3Q9HD45 589 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ATP13A2Q9NQ11 1180 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TCF7L2Q9NQB0 619 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 NECTIN3Q9NQS3 549 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 PAK1IP1Q9NWT1 392 aaPredicted RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SEPT10Q9P0V9 454 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MTRRQ9UBK8 725 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TJP2Q9UDY2 1190 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CHORDC1Q9UHD1 332 aaPredicted RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ZNF451Q9Y4E5 1061 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 RAI2Q9Y5P3 530 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 HELZ2Q9BYK8 2649 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 AQP12BA6NM10 295 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SNTNA6NMZ2 147 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 C16orf96A6NNT2 1141 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 AIM2O14862 343 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ZW10O43264 779 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 BRINP1O60477 761 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 VAPBO95292 243 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 RASAL1O95294 804 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 KRT1P04264 644 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 JUNP05412 331 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 POU2F2P09086 479 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 NAT2P11245 290 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 KRT10P13645 584 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CD58P19256 250 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 FGFR3P22607 806 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TBXAS1P24557 533 aaPredicted RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ARCN1P48444 511 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TUFMP49411 452 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CYP2J2P51589 502 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CLCN3P51790 818 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SRP54P61011 504 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 BNC1Q01954 994 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SCAPQ12770 1279 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TARDBPQ13148 414 aaKnown RBP eCLIP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ART3Q13508 389 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 LRRC32Q14392 662 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 DHCR24Q15392 516 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MAPRE2Q15555 327 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CRY1Q16526 586 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 HIST2H2ACQ16777 129 aaPredicted RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 DGUOKQ16854 277 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ANO4Q32M45 955 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 LMBRD2Q68DH5 695 aaPredicted RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 USP17L6PQ6QN14 398 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 Q6ZS52 159 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 SLC22A16Q86VW1 577 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 KSR1Q8IVT5 923 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 AQP12AQ8IXF9 295 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 LGI2Q8N0V4 545 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CBARPQ8N350 705 aaPredicted RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 NATD1Q8N6N6 113 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 LINC01465Q8N7H1 131 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MCUQ8NE86 351 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 OR6Q1Q8NGQ2 317 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 URGCPQ8TCY9 931 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ISL2Q96A47 359 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 LRIG1Q96JA1 1093 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ZC3H10Q96K80 434 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 UBXN10Q96LJ8 280 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CEP19Q96LK0 163 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TWNKQ96RR1 684 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 LPIN3Q9BQK8 851 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TRIM15Q9C019 465 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ST6GALNAC4Q9H4F1 302 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 COG4Q9H9E3 785 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms