RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CADM1Q9BY67 442 aaKnown RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 ABCG4Q9H172 646 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 UNC93B1Q9H1C4 597 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 RGS17Q9UGC6 210 aaPredicted RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 M0R036 132 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 SAP18O00422 153 aaKnown RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 LINGO3P0C6S8 592 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 NMBRP28336 390 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 TARDBPQ13148 414 aaKnown RBP eCLIP15.26■□□□□ 0.03
CHD4-210ENST00000544040 MINDY4Q4G0A6 757 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 ALG1LQ6GMV1 187 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 SLC8B1Q6J4K2 584 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 CIR1Q86X95 450 aaPredicted RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 SOCS4Q8WXH5 440 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 CPT1BQ92523 772 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 C7orf26Q96N11 449 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 RNF208Q9H0X6 261 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 KAT8Q9H7Z6 458 aaKnown RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 UNC13BO14795 1591 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 MAGEB17A8MXT2 336 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 MATN2O00339 956 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
CHD4-210ENST00000544040 PPM1AP35813 382 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 ABCA11PQ4W5N1 156 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 MED27Q6P2C8 311 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 C11orf65Q8NCR3 313 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 ASB12Q8WXK4 309 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 LDOC1O95751 146 aaPredicted RBP15.25■□□□□ 0.03
CHD4-210ENST00000544040 CD48P09326 243 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 GSTT2BP0CG30 244 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 MTHFD1P11586 935 aaKnown RBP15.25■□□□□ 0.03
CHD4-210ENST00000544040 GBE1Q04446 702 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 BLMHQ13867 455 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 LACTB2Q53H82 288 aaPredicted RBP15.25■□□□□ 0.03
CHD4-210ENST00000544040 GPALPP1Q8IXQ4 340 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 GPR135Q8IZ08 494 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 TREM1Q9NP99 234 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 GMIPQ9P107 970 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 AASSQ9UDR5 926 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 SNX10Q9Y5X0 201 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 KANTRA0A1W2PQU2 76 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 H3BSH0 61 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 SHOX2O60902 331 aaPredicted RBP15.25■□□□□ 0.03
CHD4-210ENST00000544040 PITPNAQ00169 270 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 SLC51AQ86UW1 340 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 CAND1Q86VP6 1230 aaKnown RBP15.25■□□□□ 0.03
CHD4-210ENST00000544040 SVOPLQ8N434 492 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 KCT2Q8NC54 265 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 MFSD3Q96ES6 412 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 MUC13Q9H3R2 512 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 CNTNAP1P78357 1384 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 CACNG1Q06432 222 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 CHAF1BQ13112 559 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 DUSP4Q13115 394 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 EEF1DP3Q658K8 133 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 SLITRK4Q8IW52 837 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 KCNC2Q96PR1 638 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 GPATCH1Q9BRR8 931 aaKnown RBP15.25■□□□□ 0.03
CHD4-210ENST00000544040 E9PAM4 449 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 DNM1LO00429 736 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 LHCGRP22888 699 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 CCNFP41002 786 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 C9orf57Q5W0N0 161 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 KIAA1161Q6NSJ0 714 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 ZNF782Q6ZMW2 699 aaPredicted RBP15.25■□□□□ 0.03
CHD4-210ENST00000544040 IQCHQ86VS3 1027 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 CNTD1Q8N815 330 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 OR6K6Q8NGW6 343 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 CPXM1Q96SM3 734 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 TMEM168Q9H0V1 697 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 EHD1Q9H4M9 534 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 MIOSQ9NXC5 875 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 PCDHB1Q9Y5F3 818 aa15.25■□□□□ 0.03
CHD4-210ENST00000544040 PITPNM1O00562 1244 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ADAMDEC1O15204 470 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ARL3P36405 182 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ATP13A5Q4VNC0 1218 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 C6orf183Q5T699 404 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 GALNT7Q86SF2 657 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 NUDT4Q9NZJ9 180 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 MTRRQ9UBK8 725 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ABCG2Q9UNQ0 655 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 INMTO95050 263 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 GOT2P00505 430 aaKnown RBP15.24■□□□□ 0.03
CHD4-210ENST00000544040 GNRH1P01148 92 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 SPAM1P38567 509 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ZMYND11Q15326 602 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 WSCD2Q2TBF2 565 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 METTL3Q86U44 580 aaKnown RBP15.24■□□□□ 0.03
CHD4-210ENST00000544040 CEP76Q8TAP6 659 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 SMPDL3BQ92485 455 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 LGR4Q9BXB1 951 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 GBA3Q9H227 469 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 MOV10Q9HCE1 1003 aaKnown RBP15.24■□□□□ 0.03
CHD4-210ENST00000544040 AMBNQ9NP70 447 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 LRRC72A6NJI9 287 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 GRM6O15303 877 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 ATP6V1G1O75348 118 aa15.24■□□□□ 0.03
CHD4-210ENST00000544040 CES1P23141 567 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms