RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MAP7D1Q3KQU3 841 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 VPS26BQ4G0F5 336 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 TCEAL5Q5H9L2 206 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 IL27RAQ6UWB1 636 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 RNF111Q6ZNA4 994 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 HSD11B1LQ7Z5J1 315 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 MILR1Q7Z6M3 343 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 CHCHD4Q8N4Q1 142 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 FAM156AQ8NDB6 213 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 OR2T11Q8NH01 316 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 UBTD2Q8WUN7 234 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 OSCP1Q8WVF1 389 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 RHBDF1Q96CC6 855 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 SPDL1Q96EA4 605 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 CD244Q9BZW8 370 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 FAM83DQ9H4H8 585 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 RAD18Q9NS91 495 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 FBXO10Q9UK96 956 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 PSMD13Q9UNM6 376 aa16.77■□□□□ 0.27
PTPRO-209ENST00000543886 CFAP99D6REC4 459 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 EIF3FO00303 357 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 CA3P07451 260 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 ATP1B2P14415 290 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 CAPN3P20807 821 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 MRPL19P49406 292 aaKnown RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 ATXN3P54252 364 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 KCNK10P57789 538 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 DCDC1P59894 354 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 ST8SIA6P61647 398 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 GRIK2Q13002 908 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 GPM6BQ13491 265 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 ZNF805Q5CZA5 627 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 SAMD4BQ5PRF9 694 aaKnown RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 CAPRIN2Q6IMN6 1127 aaKnown RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 FNDC5Q8NAU1 212 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 LRIG1Q96JA1 1093 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 LRRC3BQ96PB8 259 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 ECSITQ9BQ95 431 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 TMEM79Q9BSE2 394 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 MTG2Q9H4K7 406 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 SMOXQ9NWM0 555 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 TMPRSS11EQ9UL52 423 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 ACOT8O14734 319 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 HOXC11O43248 304 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 CTSLP07711 333 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 TIMP2P16035 220 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 AOAHP28039 575 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 RALGDSQ12967 914 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 TRAF3Q13114 568 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 METTL2BQ6P1Q9 378 aaKnown RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 C8orf82Q6P1X6 216 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 PRMT9Q6P2P2 845 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 BLOC1S3Q6QNY0 202 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 RETREG3Q86VR2 466 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 C12orf76Q8N812 135 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 SKA2Q8WVK7 121 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 C1orf50Q9BV19 199 aa16.76■□□□□ 0.27
PTPRO-209ENST00000543886 C6orf203Q9P0P8 240 aaPredicted RBP16.76■□□□□ 0.27
PTPRO-209ENST00000543886 MYO7AQ13402 2215 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 PABPN1LA6NDY0 278 aaKnown RBP16.75■□□□□ 0.27
PTPRO-209ENST00000543886 C9JVG2 144 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 K7EPI3 171 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 SYNCRIPO60506 623 aaKnown RBP16.75■□□□□ 0.27
PTPRO-209ENST00000543886 ANXA5P08758 320 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 CISD3P0C7P0 127 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 VASPP50552 380 aaPredicted RBP16.75■□□□□ 0.27
PTPRO-209ENST00000543886 SLC7A2P52569 658 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 HSPA14Q0VDF9 509 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 TRIM25Q14258 630 aaKnown RBP16.75■□□□□ 0.27
PTPRO-209ENST00000543886 TRIP10Q15642 601 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 PDCD4Q53EL6 469 aaKnown RBP16.75■□□□□ 0.27
PTPRO-209ENST00000543886 COQ5Q5HYK3 327 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 C6orf136Q5SQH8 315 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 TMC5Q6UXY8 1006 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 ADGRD2Q7Z7M1 963 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 SPATA24Q86W54 205 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 PQLC1Q8N2U9 271 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 TSPEARQ8WU66 669 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 SCAMP4Q969E2 229 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 SLC39A3Q9BRY0 314 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 BRINP2Q9C0B6 783 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 GID8Q9NWU2 228 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 TMEM181Q9P2C4 612 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 DKK3Q9UBP4 350 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 ST14Q9Y5Y6 855 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 LAMA3Q16787 3333 aa16.75■□□□□ 0.27
PTPRO-209ENST00000543886 GRXCR1A8MXD5 290 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 SLC22A3O75751 556 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 C8GP07360 202 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 ETV3P41162 512 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 VIPR2P41587 438 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 GDF5P43026 501 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 PIK3CGP48736 1102 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 HTR6P50406 440 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 BOP1Q14137 746 aaKnown RBP16.74■□□□□ 0.27
PTPRO-209ENST00000543886 NR6A1Q15406 480 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 LRRC36Q1X8D7 754 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 POM121L1PQ3SYA9 428 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 LPCAT4Q643R3 524 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 Q6ZVL8 140 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms