RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 ANAPC2Q9UJX6 822 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 CROTQ9UKG9 612 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 PADI1Q9ULC6 663 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 TFR2Q9UP52 801 aa12.83□□□□□ -0.36
RTN3-212ENST00000543123 OR5K3A6NET4 321 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 SOWAHDA6NJG2 315 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 C21orf140B9A014 251 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 MATN2O00339 956 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 RECKO95980 971 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 ZNF28P17035 718 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 OAS2P29728 719 aaKnown RBP12.82□□□□□ -0.36
RTN3-212ENST00000543123 HSD11B2P80365 405 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 NFKB2Q00653 900 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 PRKAA1Q13131 559 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 GSE1Q14687 1217 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 GPR33Q49SQ1 333 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 TMTC4Q5T4D3 741 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 ARHGEF18Q6ZSZ5 1173 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 KIAA1328Q86T90 577 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 SYCE1Q8N0S2 351 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 OR8K5Q8NH50 307 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 HM13Q8TCT9 377 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 COPS8Q99627 209 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 TBL1YQ9BQ87 522 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 TRIM4Q9C037 500 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 WWP1Q9H0M0 922 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 KIR3DX1Q9H7L2 352 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 FANCEQ9HB96 536 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 HRASLS2Q9NWW9 162 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 FKBPLQ9UIM3 349 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 POLHQ9Y253 713 aa12.82□□□□□ -0.36
RTN3-212ENST00000543123 IGHV5-51A0A0C4DH38 117 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 MIF4GDA9UHW6 222 aaKnown RBP12.81□□□□□ -0.36
RTN3-212ENST00000543123 MKRN2OSH3BPM6 223 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 MAP3K7O43318 606 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 KATNA1O75449 491 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
RTN3-212ENST00000543123 GSTM1P09488 218 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 PRLHRP49683 370 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 ZNF75DP51815 510 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 VAV2P52735 878 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 ZNF140P52738 457 aaPredicted RBP12.81□□□□□ -0.36
RTN3-212ENST00000543123 GSTM4Q03013 218 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 DNASE1L3Q13609 305 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 LACTB2Q53H82 288 aaPredicted RBP12.81□□□□□ -0.36
RTN3-212ENST00000543123 SNX20Q7Z614 316 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 NXPE1Q8N323 547 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 CCDC110Q8TBZ0 833 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 ALS2CR12Q96Q35 445 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 APOL2Q9BQE5 337 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 GORASP1Q9BQQ3 440 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 C10orf88Q9H8K7 445 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 ARNT2Q9HBZ2 717 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 LHX9Q9NQ69 397 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 FGF21Q9NSA1 209 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 FAM8A1Q9UBU6 413 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 SLC24A2Q9UI40 661 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 PCDHGA6Q9Y5G7 932 aa12.81□□□□□ -0.36
RTN3-212ENST00000543123 CFAP20Q9Y6A4 193 aaKnown RBP12.81□□□□□ -0.36
RTN3-212ENST00000543123 C17orf113A0A1B0GUU1 675 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 AGAP14A8MT82 685 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 PYCARD-AS1I3L0S3 204 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 IFRD1O00458 451 aaPredicted RBP12.8□□□□□ -0.36
RTN3-212ENST00000543123 CPNE3O75131 537 aaKnown RBP12.8□□□□□ -0.36
RTN3-212ENST00000543123 ATP1B2P14415 290 aaPredicted RBP12.8□□□□□ -0.36
RTN3-212ENST00000543123 TUBB4BP68371 445 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 XIAPP98170 497 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 TLE1Q04724 770 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 TUBB2AQ13885 445 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 PTPRCAPQ14761 206 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 PARP6Q2NL67 630 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 P3H1Q32P28 736 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 PTRH1Q86Y79 214 aaKnown RBP12.8□□□□□ -0.36
RTN3-212ENST00000543123 CFAP206Q8IYR0 622 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 D2HGDHQ8N465 521 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 INSM2Q96T92 566 aaPredicted RBP12.8□□□□□ -0.36
RTN3-212ENST00000543123 MAP3K3Q99759 626 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 TUBB2BQ9BVA1 445 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 GPR87Q9BY21 358 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 TWSG1Q9GZX9 223 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 LRRC40Q9H9A6 602 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 SOHLH2Q9NX45 425 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 AMFRQ9UKV5 643 aa12.8□□□□□ -0.36
RTN3-212ENST00000543123 PIPSLA2A3N6 862 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 OR6C74A6NCV1 312 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 RCCD1A6NED2 376 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 QSOX1O00391 747 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 PSMD3O43242 534 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 CREG1O75629 220 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 RFPL1O75677 317 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 POLBP06746 335 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 EBLN1P0CF75 366 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 FOLR1P15328 257 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 MC4RP32245 332 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 CASRP41180 1078 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 PPP1CAP62136 330 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 RPS15P62841 145 aaKnown RBP12.79□□□□□ -0.36
RTN3-212ENST00000543123 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
RTN3-212ENST00000543123 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms