RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CCR7P32248 378 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 HALP42357 657 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 FASLGP48023 281 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 CLCA4Q14CN2 919 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 CNSTQ6PJW8 725 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC9B2Q86UD5 537 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 KRT222Q8N1A0 295 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 AVL9Q8NBF6 648 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 SARS2Q9NP81 518 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 ZFATQ9P243 1243 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 LRIT1Q9P2V4 623 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 PSMD13Q9UNM6 376 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 RNF215Q9Y6U7 377 aa16.76■□□□□ 0.27
RABGGTA-203ENST00000543002 TCRBV9S1A1TA0A576 114 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC5A10A0PJK1 596 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 SPAG6O75602 509 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 AHSGP02765 367 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 CDK4P11802 303 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 PNLIPP16233 465 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 GABRB3P28472 473 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC19A1P41440 591 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 UBE2IP63279 158 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 PLOD1Q02809 727 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 BIRC2Q13490 618 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 PERM1Q5SV97 790 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 CAPRIN2Q6IMN6 1127 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 DGLUCYQ7Z3D6 616 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 ZNF438Q7Z4V0 828 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 EIF1ADQ8N9N8 165 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 CCDC74AQ96AQ1 378 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 WWP1Q9H0M0 922 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 OR52A5Q9H2C5 316 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 CCDC68Q9H2F9 335 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 STN1Q9H668 368 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 ZNF624Q9P2J8 865 aaPredicted RBP16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC17A6Q9P2U8 582 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 CPNE7Q9UBL6 633 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 COMMD10Q9Y6G5 202 aa16.75■□□□□ 0.27
RABGGTA-203ENST00000543002 OR52A4PA6NMU1 304 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 RHPN2P1A8MT19 583 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 KPNA5O15131 536 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 PPM1DO15297 605 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 NIPSNAP2O75323 286 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 APOA4P06727 396 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC35G4P0C7Q5 338 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 AOAHP28039 575 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 PDHA2P29803 388 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 PREPP48147 710 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 E2F1Q01094 437 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 HHEXQ03014 270 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 BOP1Q14137 746 aaKnown RBP16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 BRD3Q15059 726 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 RPE65Q16518 533 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 KYNUQ16719 465 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 CCDC157Q569K6 752 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 ZNF549Q6P9A3 640 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 NAPRTQ6XQN6 538 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 SLC26A11Q86WA9 606 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 SPDYE1Q8NFV5 336 aaPredicted RBP16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 ASZ1Q8WWH4 475 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 CDKL2Q92772 493 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 SH3KBP1Q96B97 665 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 RMDN2Q96LZ7 410 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 INSM2Q96T92 566 aaPredicted RBP16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 SMYD2Q9NRG4 433 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 LATS2Q9NRM7 1088 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 NSMCE4AQ9NXX6 385 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 NINJ2Q9NZG7 142 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 ASXL3Q9C0F0 2248 aa16.74■□□□□ 0.27
RABGGTA-203ENST00000543002 FAM159BA6NKW6 160 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 GPC4O75487 556 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 VIPP01282 170 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 C1QAP02745 245 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 CHRM3P20309 590 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 STX2P32856 288 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 CD151P48509 253 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 NR1D2Q14995 579 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 TMED2Q15363 201 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 SYTL3Q4VX76 610 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 OTOAQ7RTW8 1153 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 TRIM48Q8IWZ4 208 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 KCNJ9Q92806 393 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 TMEM159Q96B96 161 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 CXorf40BQ96DE9 158 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 C12orf66Q96MD2 445 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 CCDC3Q9BQI4 270 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 AARSD1Q9BTE6 412 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 CDC42EP4Q9H3Q1 356 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 ANKZF1Q9H8Y5 726 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 POT1Q9NUX5 634 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 RABGEF1Q9UJ41 708 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 CORO1CQ9ULV4 474 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 CDYLQ9Y232 598 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 PSAT1Q9Y617 370 aa16.73■□□□□ 0.27
RABGGTA-203ENST00000543002 E5RI56 91 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 IFRD1O00458 451 aaPredicted RBP16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 SLCO2B1O94956 709 aa16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 MTHFD1P11586 935 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-203ENST00000543002 TNFRSF8P28908 595 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms