RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ATG14Q6ZNE5 492 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 ARHGEF18Q6ZSZ5 1173 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 DET1Q7L5Y6 550 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 PEX26Q7Z412 305 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 SIDT2Q8NBJ9 832 aaKnown RBP15.27■□□□□ 0.04
VPS33A-206ENST00000542310 OR13C4Q8NGS5 318 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 C12orf66Q96MD2 445 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 COPS8Q99627 209 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 BAG1Q99933 345 aaPredicted RBP15.27■□□□□ 0.04
VPS33A-206ENST00000542310 CCM2Q9BSQ5 444 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 WWP1Q9H0M0 922 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 LRRC40Q9H9A6 602 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 VPS37BQ9H9H4 285 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 IL17BQ9UHF5 180 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 PCDHGA6Q9Y5G7 932 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 MYO18BQ8IUG5 2567 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 TRBV5-4A0A0C4DH59 114 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 C17orf113A0A1B0GUU1 675 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 MATN2O00339 956 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 SUV39H1O43463 412 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 LDB2O43679 373 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 SPAG6O75602 509 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 KIAA0754O94854 1291 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 GSTM1P09488 218 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 TCN2P20062 427 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 OAS2P29728 719 aaKnown RBP15.26■□□□□ 0.03
VPS33A-206ENST00000542310 PPP1CAP62136 330 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 GSTM4Q03013 218 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 KIF5AQ12840 1032 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 TUBB3Q13509 450 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 PARP6Q2NL67 630 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 AADACL2Q6P093 401 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 TMEM139Q8IV31 216 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 UNC5BQ8IZJ1 945 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 RMDN2Q96LZ7 410 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 INSM2Q96T92 566 aaPredicted RBP15.26■□□□□ 0.03
VPS33A-206ENST00000542310 FAM118BQ9BPY3 351 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 SLC24A2Q9UI40 661 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 KCND3Q9UK17 655 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 CROTQ9UKG9 612 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 RARRES3Q9UL19 164 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 KCTD3Q9Y597 815 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 COLEC10Q9Y6Z7 277 aa15.26■□□□□ 0.03
VPS33A-206ENST00000542310 IGHV5-51A0A0C4DH38 117 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 C21orf140B9A014 251 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 NKX2-8O15522 239 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 WISP1O95388 367 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 RECKO95980 971 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 PTMAP06454 111 aaKnown RBP15.25■□□□□ 0.03
VPS33A-206ENST00000542310 PRKAR1AP10644 381 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 ATP1B2P14415 290 aaPredicted RBP15.25■□□□□ 0.03
VPS33A-206ENST00000542310 ACRV1P26436 265 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 DLSTP36957 453 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 CAPRIN2Q6IMN6 1127 aaKnown RBP15.25■□□□□ 0.03
VPS33A-206ENST00000542310 DUS1LQ6P1R4 473 aaKnown RBP15.25■□□□□ 0.03
VPS33A-206ENST00000542310 D2HGDHQ8N465 521 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 GALNT6Q8NCL4 622 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 OR8K5Q8NH50 307 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 SLC35B2Q8TB61 432 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 UBE2Q2Q8WVN8 375 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 APOBEC4Q8WW27 367 aaKnown RBP15.25■□□□□ 0.03
VPS33A-206ENST00000542310 MAP3K3Q99759 626 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 CLMPQ9H6B4 373 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 ZDHHC3Q9NYG2 299 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 IMPACTQ9P2X3 320 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 LNPEPQ9UIQ6 1025 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 PCDHB3Q9Y5E6 796 aa15.25■□□□□ 0.03
VPS33A-206ENST00000542310 CFAP20Q9Y6A4 193 aaKnown RBP15.25■□□□□ 0.03
VPS33A-206ENST00000542310 UBA6A0AVT1 1052 aaPredicted RBP15.24■□□□□ 0.03
VPS33A-206ENST00000542310 DDX3YO15523 660 aaKnown RBP15.24■□□□□ 0.03
VPS33A-206ENST00000542310 PSMD3O43242 534 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 ZBTB11O95625 1053 aaPredicted RBP15.24■□□□□ 0.03
VPS33A-206ENST00000542310 AP2A1O95782 977 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 CCNYL3P0C7X3 344 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 PSMA3P25788 255 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 CDC25BP30305 580 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 MC4RP32245 332 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 CSRP3P50461 194 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 HSD11B2P80365 405 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 RPA4Q13156 261 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 ZNF658BQ4V348 819 aaPredicted RBP15.24■□□□□ 0.03
VPS33A-206ENST00000542310 ARMC6Q6NXE6 501 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 ACVR1CQ8NER5 493 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 STYXQ8WUJ0 223 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 SEC14L1Q92503 715 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 HES6Q96HZ4 224 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 DNAJC1Q96KC8 554 aaKnown RBP15.24■□□□□ 0.03
VPS33A-206ENST00000542310 COG4Q9H9E3 785 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 LATS2Q9NRM7 1088 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 NLE1Q9NVX2 485 aaPredicted RBP15.24■□□□□ 0.03
VPS33A-206ENST00000542310 HRASLS2Q9NWW9 162 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 BTRCQ9Y297 605 aa15.24■□□□□ 0.03
VPS33A-206ENST00000542310 ERI2A8K979 691 aaKnown RBP15.23■□□□□ 0.03
VPS33A-206ENST00000542310 QSOX1O00391 747 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 EBLN1P0CF75 366 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 FOLR1P15328 257 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 F8A1P23610 371 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 CD151P48509 253 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 ARL4DP49703 201 aa15.23■□□□□ 0.03
VPS33A-206ENST00000542310 TUBB4BP68371 445 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms