RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 HIPK2Q9H2X6 1198 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 SLCO5A1Q9H2Y9 848 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 DNAJB4Q9UDY4 337 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 TSPYL4Q9UJ04 414 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 ZNF580Q9UK33 172 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 SRPRBQ9Y5M8 271 aaKnown RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 CLIC4Q9Y696 253 aa4.18□□□□□ -1.74
SNHG1-217ENST00000541578 TNS1Q9HBL0 1735 aaKnown RBP4.18□□□□□ -1.74
SNHG1-217ENST00000541578 NEXMIFQ5QGS0 1516 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 EIF4E1BA6NMX2 242 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 PI4K2BG5E9Z4 385 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SMAD9O15198 467 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SLC16A5O15375 505 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SMAD6O43541 496 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 CLDN7O95471 211 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 THEGLP0DJG4 465 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 PDGFRAP16234 1089 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 DDX5P17844 614 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 ACADLP28330 430 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 HOXC13P31276 330 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 PRKCIP41743 596 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 PGGT1BP53609 377 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 HSPB3Q12988 150 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 GRIK2Q13002 908 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SMU1Q2TAY7 513 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 MMEL1Q495T6 779 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 FAM98BQ52LJ0 330 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SFMBT2Q5VUG0 894 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 MOXD1Q6UVY6 613 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 INTS8Q75QN2 995 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 DET1Q7L5Y6 550 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 LDB1Q86U70 411 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 TMEM173Q86WV6 379 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 RBFAQ8N0V3 343 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SPATA6LQ8N4H0 392 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SLC4A11Q8NBS3 891 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 OR1J2Q8NGS2 313 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 CFAP61Q8NHU2 1237 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 HM13Q8TCT9 377 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 TRPC4APQ8TEL6 797 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 LPAR1Q92633 364 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SNAPC3Q92966 411 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 ERGIC1Q969X5 290 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SPACA9Q96E40 222 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 THOC3Q96J01 351 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 ZNF830Q96NB3 372 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 FAM129AQ9BZQ8 928 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 TMEM39BQ9GZU3 492 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 KCNK15Q9H427 330 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 RAD21L1Q9H4I0 556 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 PPP1R3EQ9H7J1 279 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 CNOT10Q9H9A5 744 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 MRPL44Q9H9J2 332 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 SPAG4Q9NPE6 437 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 ACSS1Q9NUB1 689 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 ADPRHL2Q9NX46 363 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 MTMR10Q9NXD2 777 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 LARSQ9P2J5 1176 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 ARMCX3Q9UH62 379 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 NFE2L3Q9Y4A8 694 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 TNS3Q68CZ2 1445 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 RRBP1Q9P2E9 1410 aaKnown RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 NRXN3Q9Y4C0 1643 aa4.17□□□□□ -1.74
SNHG1-217ENST00000541578 RGPD8O14715 1765 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-217ENST00000541578 RREB1Q92766 1687 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 CDC42BPGQ6DT37 1551 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 PRAG1Q86YV5 1406 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 M0QZ24 198 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 HS3ST1O14792 307 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 PLRG1O43660 514 aaKnown RBP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 TSPAN1O60635 241 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 SLCO2B1O94956 709 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 EGFP01133 1207 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 IFNA2P01563 188 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 ICAM1P05362 532 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 SRCP12931 536 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 HOXB2P14652 356 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 DCTDP32321 178 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 TCF7P36402 384 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 KCNJ4P48050 445 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 PPP3CCP48454 512 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 CXCR3P49682 368 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 ENTPD1P49961 510 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 METAP2P50579 478 aaKnown RBP eCLIP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 RAD23BP54727 409 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 CDH13P55290 713 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 FOXM1Q08050 763 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 DDR1Q08345 913 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 NFE2L1Q14494 772 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 SLC15A2Q16348 729 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 MEP1AQ16819 746 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 C2orf68Q2NKX9 166 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 NHSL2Q5HYW2 709 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 ZDHHC20Q5W0Z9 365 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 KIAA1161Q6NSJ0 714 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 C11orf57Q6ZUT1 292 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 TSPAN33Q86UF1 283 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 DZIP1Q86YF9 867 aaKnown RBP4.16□□□□□ -1.74
SNHG1-217ENST00000541578 CARNMT1Q8N4J0 409 aa4.16□□□□□ -1.74
SNHG1-217ENST00000541578 MOSPD2Q8NHP6 518 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms