RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ATP6AP2O75787 350 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 ASGR2P07307 311 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 ESRRAP11474 423 aaPredicted RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 CALB2P22676 271 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 PTPN4P29074 926 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 PREPP48147 710 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 RPS14P62263 151 aaKnown RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 TMEM115Q12893 351 aaPredicted RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 LCP2Q13094 533 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 KLF10Q13118 480 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 NAA25Q14CX7 972 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 ZNF658BQ4V348 819 aaPredicted RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 RAET1GQ6H3X3 334 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 FRA10AC1Q70Z53 315 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 PDPRQ8NCN5 879 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 HMGCLL1Q8TB92 370 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 RHBDF1Q96CC6 855 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 NECTIN4Q96NY8 510 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 CCDC28BQ9BUN5 200 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 DYRK4Q9NR20 520 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 LIMD1Q9UGP4 676 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 PDE10AQ9Y233 779 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 STK38LQ9Y2H1 464 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 COL6A3P12111 3177 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 A0A1W2PQF6 199 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 IGLON5A6NGN9 336 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 SLCO1B7G3V0H7 640 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 H0YHG0 523 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 OR7A17O14581 309 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 AZIN1O14977 448 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 PIP5K1BO14986 540 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 LILRB5O75023 590 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 GPC4O75487 556 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 ATP5HO75947 161 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 NFKBIAP25963 317 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 PBLDP30039 288 aaPredicted RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 TNFRSF4P43489 277 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 ERVPABLB-1P60509 514 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 FGL2Q14314 439 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 TMEM220Q6QAJ8 160 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 SCIMPQ6UWF3 145 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 GOLGA7Q7Z5G4 137 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 DSG4Q86SJ6 1040 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 ADGRG6Q86SQ4 1221 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 LONP2Q86WA8 852 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 RAVER1Q8IY67 606 aaKnown RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 HDDC3Q8N4P3 179 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 IL17RCQ8NAC3 791 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 RBM15BQ8NDT2 890 aaKnown RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 ELMO1Q92556 727 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 SLC45A3Q96JT2 553 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 HGH1Q9BTY7 390 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 OR2AG1Q9H205 316 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 KCNK12Q9HB15 430 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 CD248Q9HCU0 757 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 CD93Q9NPY3 652 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 RAD18Q9NS91 495 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 KLHL42Q9P2K6 505 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 ZFR2Q9UPR6 939 aaKnown RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 COPG1Q9Y678 874 aaKnown RBP12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 PIAS3Q9Y6X2 628 aa12.04□□□□□ -0.48
AP003559.1-201ENST00000540906 CFAP73A6NFT4 308 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 B2RBV5 119 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 RAD51BO15315 384 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 NUAK1O60285 661 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 OR4F21O95013 312 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 FGF4P08620 206 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 PIK3R1P27986 724 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 GPR1P46091 355 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 PCBP2Q15366 365 aaKnown RBP eCLIP12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 CRY1Q16526 586 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 RBBP7Q16576 425 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 TTLL9Q3SXZ7 439 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 SLC44A4Q53GD3 710 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 LDLRAP1Q5SW96 308 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 LETMD1Q6P1Q0 360 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 ACAD11Q709F0 780 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 ZNF765Q7L2R6 523 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 NLRP8Q86W28 1048 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 PHYKPLQ8IUZ5 450 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 RASGRP3Q8IV61 690 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 CLYBLQ8N0X4 340 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 SLC44A3Q8N4M1 653 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 CXorf40AQ8TE69 158 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 TWIST2Q8WVJ9 160 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 ASB11Q8WXH4 323 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 KLK6Q92876 244 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 LENG8Q96PV6 779 aaPredicted RBP12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 GABRG3Q99928 467 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 NOL11Q9H8H0 719 aaKnown RBP12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 MBNL1Q9NR56 388 aaKnown RBP12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 ATXN10Q9UBB4 475 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 CIDEBQ9UHD4 219 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 ST14Q9Y5Y6 855 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 ZFC3H1O60293 1989 aaKnown RBP12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 MYO10Q9HD67 2058 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
AP003559.1-201ENST00000540906 LOC100653049A0A140TA62 436 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms