RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ANKMY1Q9P2S6 941 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 PADI3Q9ULW8 664 aa5.17□□□□□ -1.58
PROM1-220ENST00000540805 TTC24A2A3L6 582 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 FGBP02675 491 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 AHSGP02765 367 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CBLP22681 906 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 GABRR2P28476 465 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 PLA2G16P53816 162 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CDH17Q12864 832 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CSHL1Q14406 222 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 PAFAH1B3Q15102 231 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 RAP1GAP2Q684P5 730 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 XAF1Q6GPH4 301 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CYP20A1Q6UW02 462 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 GALNT13Q8IUC8 556 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 MMAAQ8IVH4 418 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 FUNDC1Q8IVP5 155 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CEP97Q8IW35 865 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 MINDY1Q8N5J2 469 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 ESX1Q8N693 406 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 HEXDCQ8WVB3 486 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 TMEM40Q8WWA1 233 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 C18orf25Q96B23 403 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 LRCH3Q96II8 777 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 C17orf80Q9BSJ5 609 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 MLPHQ9BV36 600 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 FICDQ9BVA6 458 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CLPBQ9H078 707 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 TKTL2Q9H0I9 626 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 BRD9Q9H8M2 597 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 PARVBQ9HBI1 364 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 MRM3Q9HC36 420 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 FBRSL1Q9HCM7 1045 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 AKIP1Q9NQ31 210 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CCDC177Q9NQR7 707 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 CMTM6Q9NX76 183 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 MTRRQ9UBK8 725 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 EYSQ5T1H1 3165 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 COL1A2P08123 1366 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 TRBV23OR9-2A0A075B6M9 112 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 ATP6AP2A0A1C7CYW4 349 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 A8MT66 165 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 H0Y858 1186 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 MSI1O43347 362 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 ATP6AP2O75787 350 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 IPO13O94829 963 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 MFN2O95140 757 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 FKBP9O95302 570 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 SERPINF2P08697 491 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 MTHFD1P11586 935 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 NFKB1P19838 968 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 GPX3P22352 226 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 FSHRP23945 695 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 IGFBP6P24592 240 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 SHMT2P34897 504 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 ATP5C1P36542 298 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 SCNN1AP37088 669 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 HNF4AP41235 474 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 LEPRP48357 1165 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 POU6F2P78424 691 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 POU4F1Q01851 419 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 AQP6Q13520 282 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 ACOX1Q15067 660 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 FAM83EQ2M2I3 478 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 ZIK1Q3SY52 487 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 DUSP28Q4G0W2 176 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 TMEM236Q5W0B7 351 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 KCTD11Q693B1 232 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 GTF2IRD2BQ6EKJ0 949 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 RPS27LQ71UM5 84 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 FKBP9P1Q75LS8 142 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 SLCO6A1Q86UG4 719 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 GTF2IRD2Q86UP8 949 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 DENND1CQ8IV53 801 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 TP53INP2Q8IXH6 220 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 SYTL1Q8IYJ3 562 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CALML6Q8TD86 181 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CCDC120Q96HB5 630 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 MUS81Q96NY9 551 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 CLSTN3Q9BQT9 956 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 FUNDC2Q9BWH2 189 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 DGCR6LQ9BY27 220 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 PRRG3Q9BZD7 231 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 HOXD1Q9GZZ0 328 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 IRF2BPLQ9H1B7 796 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 FBXO44Q9H4M3 255 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 TNFRSF12AQ9NP84 129 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 C12orf4Q9NQ89 552 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 ASAH2Q9NR71 780 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 FAM105AQ9NUU6 356 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 EVLQ9UI08 416 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 TRMT6Q9UJA5 497 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 CAB39Q9Y376 341 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 SNX5Q9Y5X3 404 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 SZT2Q5T011 3432 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 ZFC3H1O60293 1989 aaKnown RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 ERVH48-1M5A8F1 160 aa5.16□□□□□ -1.58
PROM1-220ENST00000540805 BCAS1O75363 584 aaPredicted RBP5.16□□□□□ -1.58
PROM1-220ENST00000540805 RSL1D1O76021 490 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms