RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ENO3P13929 434 aaPredicted RBP22.04■■□□□ 1.12
HOMER3-204ENST00000539827 P2RY2P41231 377 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 CTSCP53634 463 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 GBX1Q14549 363 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 PREPLQ4J6C6 727 aaPredicted RBP22.04■■□□□ 1.12
HOMER3-204ENST00000539827 TMEM52BQ4KMG9 183 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 DNAL1Q4LDG9 190 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 GPRIN3Q6ZVF9 776 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 LARP4Q71RC2 724 aaKnown RBP eCLIP22.04■■□□□ 1.12
HOMER3-204ENST00000539827 CHPFQ8IZ52 775 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 OR52B6Q8NGF0 335 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 CLPTM1LQ96KA5 538 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 TMEM79Q9BSE2 394 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 AKTIPQ9H8T0 292 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.04■■□□□ 1.12
HOMER3-204ENST00000539827 REV3LO60673 3130 aa22.04■■□□□ 1.12
HOMER3-204ENST00000539827 CCNT2O60583 730 aaKnown RBP22.03■■□□□ 1.12
HOMER3-204ENST00000539827 THRAP10827 490 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 GTF2H2Q13888 395 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 PLEKHS1Q5SXH7 462 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 GTF2H2CQ6P1K8 395 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 SCIMPQ6UWF3 145 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 NUDT18Q6ZVK8 323 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 UBE2R2Q712K3 238 aaPredicted RBP22.03■■□□□ 1.12
HOMER3-204ENST00000539827 RHBDF1Q96CC6 855 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 DENND4AQ7Z401 1863 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 K7ESM1 405 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 GIPC1O14908 333 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 SLC22A2O15244 555 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 NUAK1O60285 661 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 ARL1P40616 181 aaPredicted RBP22.03■■□□□ 1.12
HOMER3-204ENST00000539827 GDF5P43026 501 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 ERVPABLB-1P60509 514 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 TMEM115Q12893 351 aaPredicted RBP22.03■■□□□ 1.12
HOMER3-204ENST00000539827 SULT1C3Q6IMI6 304 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 CYP2U1Q7Z449 544 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 TRIM74Q86UV6 250 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 ZNF513Q8N8E2 541 aaPredicted RBP22.03■■□□□ 1.12
HOMER3-204ENST00000539827 MSLNLQ96KJ4 702 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 ZNF382Q96SR6 550 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 DENND2DQ9H6A0 471 aaPredicted RBP22.03■■□□□ 1.12
HOMER3-204ENST00000539827 RDH14Q9HBH5 336 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 CNOT6Q9ULM6 557 aaKnown RBP22.03■■□□□ 1.12
HOMER3-204ENST00000539827 PDE10AQ9Y233 779 aa22.03■■□□□ 1.12
HOMER3-204ENST00000539827 TMEM202A6NGA9 273 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 EIF3FO00303 357 aaPredicted RBP22.02■■□□□ 1.12
HOMER3-204ENST00000539827 OR7A17O14581 309 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 SOD1P00441 154 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 FTH1P02794 183 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 MPC1LP0DKB6 136 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 ADSLP30566 484 aaPredicted RBP22.02■■□□□ 1.12
HOMER3-204ENST00000539827 TIE1P35590 1138 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 CYLC2Q14093 348 aaPredicted RBP22.02■■□□□ 1.12
HOMER3-204ENST00000539827 RAET1GQ6H3X3 334 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 TMEM220Q6QAJ8 160 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 MTSS1LQ765P7 747 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 ARHGAP24Q8N264 748 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 CDYL2Q8N8U2 506 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 RP9Q8TA86 221 aaKnown RBP22.02■■□□□ 1.12
HOMER3-204ENST00000539827 CSGALNACT1Q8TDX6 532 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 CXorf40AQ8TE69 158 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 FAM161BQ96MY7 647 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 RTKNQ9BST9 563 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 HDAC8Q9BY41 377 aa22.02■■□□□ 1.12
HOMER3-204ENST00000539827 MID1O15344 667 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 TSPAN6O43657 245 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 UROSP10746 265 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 EZRP15311 586 aaKnown RBP22.01■■□□□ 1.11
HOMER3-204ENST00000539827 ITGAXP20702 1163 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 GPR1P46091 355 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 GRB7Q14451 532 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 SQLEQ14534 574 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 TCHHL1Q5QJ38 904 aaPredicted RBP22.01■■□□□ 1.11
HOMER3-204ENST00000539827 GK5Q6ZS86 529 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 PHYKPLQ8IUZ5 450 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 SNX31Q8N9S9 440 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 EZH1Q92800 747 aaPredicted RBP22.01■■□□□ 1.11
HOMER3-204ENST00000539827 ATP6V1E2Q96A05 226 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 P2RY13Q9BPV8 354 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 NUSAP1Q9BXS6 441 aaKnown RBP22.01■■□□□ 1.11
HOMER3-204ENST00000539827 CD244Q9BZW8 370 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 FADS3Q9Y5Q0 445 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 TICRRQ7Z2Z1 1910 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 K7EQS6 105 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 AIM2O14862 343 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 KPNA5O15131 536 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 KATNA1O75449 491 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 RPIAP49247 311 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 PKNOX1P55347 436 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 PIP5KL1Q5T9C9 394 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 FAM46CQ5VWP2 391 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 LETMD1Q6P1Q0 360 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 SCUBE1Q8IWY4 988 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 HMGCLL1Q8TB92 370 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 MMADHCQ9H3L0 296 aaPredicted RBP22.01■■□□□ 1.11
HOMER3-204ENST00000539827 IPPKQ9H8X2 491 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 LMCD1Q9NZU5 365 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 ANGPTL3Q9Y5C1 460 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 MTCH2Q9Y6C9 303 aa22.01■■□□□ 1.11
HOMER3-204ENST00000539827 TM7SF2O76062 418 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms