RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PDHA2P29803 388 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 SLC19A1P41440 591 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 HALP42357 657 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 ABCG1P45844 678 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 PREPP48147 710 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 LEPRP48357 1165 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 CSE1LP55060 971 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 ADARP55265 1226 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 GSTM4Q03013 218 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 BOP1Q14137 746 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 KIR2DS5Q14953 304 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 RPE65Q16518 533 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 N4BP2L1Q5TBK1 243 aaPredicted RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 C3orf62Q6ZUJ4 267 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 OR6C4Q8NGE1 309 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 GABPB2Q8TAK5 448 aaPredicted RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 NAT6Q93015 286 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 RMDN2Q96LZ7 410 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 INSM2Q96T92 566 aaPredicted RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 CCDC3Q9BQI4 270 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 TSSK1BQ9BXA7 367 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 LRRC4CQ9HCJ2 640 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 GALPQ9UBC7 116 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 ACSL5Q9ULC5 683 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 CFAP20Q9Y6A4 193 aaKnown RBP12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 DCHS1Q96JQ0 3298 aa12.45□□□□□ -0.42
TSPAN9-207ENST00000539631 TCRBV9S1A1TA0A576 114 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 RHPN2P1A8MT19 583 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 LIN7AO14910 233 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 NUDT21O43809 227 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 PIAS1O75925 651 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 DKK1O94907 266 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 AHSGP02765 367 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 GP1BAP07359 652 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 SLC35G4P0C7Q5 338 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 XRCC1P18887 633 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 AOAHP28039 575 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 FASLGP48023 281 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 UBE2IP63279 158 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 HHEXQ03014 270 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 ILKQ13418 452 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 BIRC2Q13490 618 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 KYNUQ16719 465 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 SYTL3Q4VX76 610 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 UBAP2Q5T6F2 1119 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 CAPRIN2Q6IMN6 1127 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 DUS1LQ6P1R4 473 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 DHRS13Q6UX07 377 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 KIAA0408Q6ZU52 694 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 ZNF438Q7Z4V0 828 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 SLC9B2Q86UD5 537 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 ZNF761Q86XN6 746 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 SPNS2Q8IVW8 549 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 GSPT2Q8IYD1 628 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 Q8N9G6 341 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 FAM136AQ96C01 138 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 CXorf40BQ96DE9 158 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 C12orf66Q96MD2 445 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 PANX3Q96QZ0 392 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 OR52A5Q9H2C5 316 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 SARS2Q9NP81 518 aaKnown RBP12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 NINJ2Q9NZG7 142 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 ZFATQ9P243 1243 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 CPNE7Q9UBL6 633 aa12.44□□□□□ -0.42
TSPAN9-207ENST00000539631 CXorf49A8MYA2 514 aaPredicted RBP12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 H3BMM5 538 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 GPC4O75487 556 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 VIPP01282 170 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 C1QAP02745 245 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 MTHFD1P11586 935 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 PNLIPP16233 465 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 CHRM3P20309 590 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 CLDN6P56747 220 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 OR1D5P58170 312 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 CCL7P80098 99 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 HSPA14Q0VDF9 509 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 RPA4Q13156 261 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 NR1D2Q14995 579 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 ZNF449Q6P9G9 518 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 CEP128Q6ZU80 1094 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 GALNT7Q86SF2 657 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 RELL1Q8IUW5 271 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 VRK3Q8IV63 474 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 TRIM48Q8IWZ4 208 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 FBF1Q8TES7 1133 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 NDNQ99608 321 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 AARSD1Q9BTE6 412 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 TSPYL1Q9H0U9 437 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 CCDC68Q9H2F9 335 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 CDC42EP4Q9H3Q1 356 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 STN1Q9H668 368 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 ANKZF1Q9H8Y5 726 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 IMP3Q9NV31 184 aaKnown RBP12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 CDYLQ9Y232 598 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 PSAT1Q9Y617 370 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 RP1P56715 2156 aa12.43□□□□□ -0.42
TSPAN9-207ENST00000539631 FAM159BA6NKW6 160 aa12.42□□□□□ -0.42
TSPAN9-207ENST00000539631 E5RI56 91 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms