RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 EFHD2Q96C19 240 aaPredicted RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 GPER1Q99527 375 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 SLC38A3Q99624 504 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 MYOCQ99972 504 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 CNTN6Q9UQ52 1028 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TIMM22Q9Y584 194 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 NUP98P52948 1817 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 IGKV6D-41A0A0C4DH26 115 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 PLOD3O60568 738 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 OR4Q2P0C623 313 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 UNGP13051 313 aaPredicted RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 SMPD1P17405 629 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 CDH3P22223 829 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 IL12BP29460 328 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 SP2Q02086 613 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 PRKD1Q15139 912 aaPredicted RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 FAM131AQ6UXB0 335 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 PRR23CQ6ZRP0 262 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF572Q7Z3I7 529 aaPredicted RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 THAP5Q7Z6K1 395 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TAC4Q86UU9 113 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 LPGAT1Q92604 370 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 FCRL4Q96PJ5 515 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TFB2MQ9H5Q4 396 aaKnown RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 WDR55Q9H6Y2 383 aaPredicted RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TRPV5Q9NQA5 729 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 PLK2Q9NYY3 685 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 PACSIN3Q9UKS6 424 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 MAN2B2Q9Y2E5 1009 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 MAP4K5Q9Y4K4 846 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 U3KQV3 271 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 MYH7BA7E2Y1 1941 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 GOLGA4Q13439 2230 aaKnown RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 C9P02748 559 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 IFNW1P05000 195 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 CBSLP0DN79 551 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 CBSP35520 551 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 LIPEQ05469 1076 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 EML3Q32P44 896 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 VPS26BQ4G0F5 336 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TNFAIP8L3Q5GJ75 292 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 RFWD3Q6PCD5 774 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 RALGPS2Q86X27 583 aaPredicted RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 CLHC1Q8NHS4 586 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 NEK7Q8TDX7 302 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 CLPTM1LQ96KA5 538 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 DPEP3Q9H4B8 488 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 ELOVL2Q9NXB9 296 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 THUMPD1Q9NXG2 353 aaKnown RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 ANKRD12Q6UB98 2062 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TLX3O43711 291 aaPredicted RBP6.4□□□□□ -1.38
LSAMP-207ENST00000539563 IFNA6P05013 189 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 ALAS2P22557 587 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 KHKP50053 298 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 GRB14Q14449 540 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 LINGO4Q6UY18 593 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 SPATA22Q8NHS9 363 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 SLC9A6Q92581 669 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 TMEM175Q9BSA9 504 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 COMMD4Q9H0A8 199 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 SLC35C2Q9NQQ7 365 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 ATXN10Q9UBB4 475 aa6.4□□□□□ -1.38
LSAMP-207ENST00000539563 B3GALT2O43825 422 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 RSL1D1O76021 490 aaKnown RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 TOP3BO95985 862 aaKnown RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 DMPKQ09013 629 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 FASTKD3Q14CZ7 662 aaKnown RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF311Q5JNZ3 666 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 KBTBD2Q8IY47 623 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 C2orf73Q8N5S3 287 aaPredicted RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 LRRC57Q8N9N7 239 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 RBM15BQ8NDT2 890 aaKnown RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 FAM81AQ8TBF8 368 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 PSMG2Q969U7 264 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 NTAN1Q96AB6 310 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 KLHL32Q96NJ5 620 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 PHF12Q96QT6 1004 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 FGFBP2Q9BYJ0 223 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 FZD8Q9H461 694 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 COL20A1Q9P218 1284 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 COQ4Q9Y3A0 265 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 GABRDO14764 452 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 PIGRP01833 764 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 GNAZP19086 355 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 GRK6P43250 576 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF280AP59817 542 aaPredicted RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 PPM1JQ5JR12 505 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 UBXN11Q5T124 520 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 GDPD4Q6W3E5 623 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 SAPCD2Q86UD0 394 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 HDDC3Q8N4P3 179 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 MEIOBQ8N635 442 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 FAM47BQ8NA70 645 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 PNPT1Q8TCS8 783 aaKnown RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 DCAKDQ8WVC6 231 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 FCRL5Q96RD9 977 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 OSBPL2Q9H1P3 480 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 SMPD3Q9NY59 655 aaPredicted RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 R3HDM2Q9Y2K5 976 aaKnown RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 MAGEB17A8MXT2 336 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms