RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 MAP7D2Q96T17 732 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 GPATCH1Q9BRR8 931 aaKnown RBP4.31□□□□□ -1.72
CCDC7-209ENST00000539197 PAIP1Q9H074 479 aaKnown RBP4.31□□□□□ -1.72
CCDC7-209ENST00000539197 MIOSQ9NXC5 875 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 TAB2Q9NYJ8 693 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCDC7-209ENST00000539197 ARHGAP26Q9UNA1 814 aa4.31□□□□□ -1.72
CCDC7-209ENST00000539197 IPO7O95373 1038 aaKnown RBP4.3□□□□□ -1.72
CCDC7-209ENST00000539197 CLDN1O95832 211 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 H1F0P07305 194 aaKnown RBP4.3□□□□□ -1.72
CCDC7-209ENST00000539197 UBL4AP11441 157 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 CAPN2P17655 700 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 PTGER3P43115 390 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 GPR17Q13304 367 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 C2CD6Q53TS8 623 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 RNF168Q8IYW5 571 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-209ENST00000539197 RAB42Q8N4Z0 105 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 TMEM116Q8NCL8 245 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 SGCDQ92629 289 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 ZKSCAN4Q969J2 545 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-209ENST00000539197 CLEC7AQ9BXN2 247 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 RNF186Q9NXI6 227 aa4.3□□□□□ -1.72
CCDC7-209ENST00000539197 PYGLP06737 847 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 HNF4AP41235 474 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 MS4A2Q01362 244 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 COX10Q12887 443 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 LRMPQ12912 555 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 CSTF3Q12996 717 aaKnown RBP4.29□□□□□ -1.72
CCDC7-209ENST00000539197 NAB2Q15742 525 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 DCAF10Q5QP82 559 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 ZDHHC20Q5W0Z9 365 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 ZNF343Q6P1L6 599 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 CYP20A1Q6UW02 462 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 TPRG1Q6ZUI0 275 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 DCLK2Q8N568 766 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 OR2L2Q8NH16 312 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 METTL6Q8TCB7 284 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 LRRC61Q9BV99 259 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 AGXT2Q9BYV1 514 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 DENND2DQ9H6A0 471 aaPredicted RBP4.29□□□□□ -1.72
CCDC7-209ENST00000539197 SLA2Q9H6Q3 261 aa4.29□□□□□ -1.72
CCDC7-209ENST00000539197 UGT1A4P22310 534 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 RGS2P41220 211 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 RPL7AP62424 266 aaKnown RBP4.28□□□□□ -1.72
CCDC7-209ENST00000539197 TFAP4Q01664 338 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 LGALS3BPQ08380 585 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 TAF1BQ53T94 588 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-209ENST00000539197 TMEM198Q66K66 360 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 KLC3Q6P597 504 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 CORO6Q6QEF8 472 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 HPSE2Q8WWQ2 592 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 NSL1Q96IY1 281 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 ZNF582Q96NG8 517 aaPredicted RBP4.28□□□□□ -1.72
CCDC7-209ENST00000539197 SAGE1Q9NXZ1 904 aa4.28□□□□□ -1.72
CCDC7-209ENST00000539197 DBNLQ9UJU6 430 aaKnown RBP4.28□□□□□ -1.72
CCDC7-209ENST00000539197 MEX3AA1L020 520 aaKnown RBP4.27□□□□□ -1.73
CCDC7-209ENST00000539197 KPNA7A9QM74 516 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 SMAD9O15198 467 aaKnown RBP4.27□□□□□ -1.73
CCDC7-209ENST00000539197 ATP6V0E1O15342 81 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 MAGEA11P43364 429 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 PSMC4P43686 418 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 MEP1AQ16819 746 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 GPRIN3Q6ZVF9 776 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 TSPAN33Q86UF1 283 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 GALNT13Q8IUC8 556 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 ARMC8Q8IUR7 673 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 OR4C3Q8NH37 302 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 RRP36Q96EU6 259 aaKnown RBP4.27□□□□□ -1.73
CCDC7-209ENST00000539197 TRMT1Q9NXH9 659 aaKnown RBP4.27□□□□□ -1.73
CCDC7-209ENST00000539197 TAS2R10Q9NYW0 307 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 ERAP1Q9NZ08 941 aa4.27□□□□□ -1.73
CCDC7-209ENST00000539197 HCRTR2O43614 444 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 TMCC2O75069 709 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 NDUFS3O75489 264 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 KHDRBS3O75525 346 aaKnown RBP4.26□□□□□ -1.73
CCDC7-209ENST00000539197 HIST1H2ABP04908 130 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 ZSCAN5DPP0CG00 497 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 HIST1H2ADP20671 130 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 ACADLP28330 430 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 DRP2Q13474 957 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 NECTIN1Q15223 517 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 GAGE2EQ4V326 116 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 HIST3H2AQ7L7L0 130 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 ZNF554Q86TJ5 538 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 ESX1Q8N693 406 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 HJURPQ8NCD3 748 aaPredicted RBP4.26□□□□□ -1.73
CCDC7-209ENST00000539197 KCNG4Q8TDN1 519 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 ZUFSPQ96AP4 578 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 TRAF4Q9BUZ4 470 aaPredicted RBP4.26□□□□□ -1.73
CCDC7-209ENST00000539197 UPF3AQ9H1J1 476 aaKnown RBP4.26□□□□□ -1.73
CCDC7-209ENST00000539197 GAGE2DQ9UEU5 116 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 RIPK3Q9Y572 518 aa4.26□□□□□ -1.73
CCDC7-209ENST00000539197 PEX14O75381 377 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 NXPH2O95156 264 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 MSH2P43246 934 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 MAPK9P45984 424 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 GALCP54803 685 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms