RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 BMPERQ8N8U9 685 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 DCUN1D1Q96GG9 259 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 RUNDC3BQ96NL0 473 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 SLC38A3Q99624 504 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 CARD6Q9BX69 1037 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 TBC1D10AQ9BXI6 508 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 FOXP3Q9BZS1 431 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 COG4Q9H9E3 785 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 CDYLQ9Y232 598 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 PCDHGA7Q9Y5G6 932 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 FER1L5A0AVI2 2057 aa13.41□□□□□ -0.26
CD9-208ENST00000538834 SDR42E2A6NKP2 422 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 PDZK1P1A8MUH7 402 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 PLD2O14939 933 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 CD3EAPO15446 510 aaKnown RBP13.4□□□□□ -0.26
CD9-208ENST00000538834 GPC4O75487 556 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 VIPP01282 170 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 ITGA2BP08514 1039 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 ANKRD34CP0C6C1 535 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 RPS3P23396 243 aaKnown RBP eCLIP13.4□□□□□ -0.26
CD9-208ENST00000538834 EIF2S3P41091 472 aaKnown RBP13.4□□□□□ -0.26
CD9-208ENST00000538834 GABREP78334 506 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 GPR18Q14330 331 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 ANKRD20A4Q4UJ75 823 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 RAB11FIP2Q7L804 512 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 CFAP206Q8IYR0 622 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
CD9-208ENST00000538834 OR10G6Q8NH81 332 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 CAPZA3Q96KX2 299 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 BIRC8Q96P09 236 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 TRIM56Q9BRZ2 755 aaKnown RBP13.4□□□□□ -0.26
CD9-208ENST00000538834 WWP1Q9H0M0 922 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 STN1Q9H668 368 aaKnown RBP13.4□□□□□ -0.26
CD9-208ENST00000538834 PLAC1Q9HBJ0 212 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 LATS2Q9NRM7 1088 aa13.4□□□□□ -0.26
CD9-208ENST00000538834 MDC1Q14676 2089 aaKnown RBP13.4□□□□□ -0.27
CD9-208ENST00000538834 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
CD9-208ENST00000538834 LIN7AO14910 233 aaPredicted RBP13.39□□□□□ -0.27
CD9-208ENST00000538834 NVLO15381 856 aaKnown RBP13.39□□□□□ -0.27
CD9-208ENST00000538834 TOX3O15405 576 aaPredicted RBP13.39□□□□□ -0.27
CD9-208ENST00000538834 DUX1O43812 170 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 PDHA2P29803 388 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 ETV5P41161 510 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 HALP42357 657 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 TTPAP49638 278 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 PRAMEP78395 509 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 GBX1Q14549 363 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 SEPT7Q16181 437 aaKnown RBP13.39□□□□□ -0.27
CD9-208ENST00000538834 AMZ1Q400G9 498 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 FASTKD1Q53R41 847 aaKnown RBP13.39□□□□□ -0.27
CD9-208ENST00000538834 C3orf38Q5JPI3 329 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 HIBCHQ6NVY1 386 aaPredicted RBP13.39□□□□□ -0.27
CD9-208ENST00000538834 CENPUQ71F23 418 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 PCGF5Q86SE9 256 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 JAMLQ86YT9 394 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 OR6P1Q8NGX9 317 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 FGF11Q92914 225 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 CCDC74BQ96LY2 380 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 TCF12Q99081 682 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 SPRY4Q9C004 299 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 STRADBQ9C0K7 418 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 KIR3DX1Q9H7L2 352 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 CATSPERZQ9NTU4 200 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 FAM169AQ9Y6X4 670 aa13.39□□□□□ -0.27
CD9-208ENST00000538834 SMAPO00193 183 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 PRMT5O14744 637 aaPredicted RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 USP1O94782 785 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 UBXN7O94888 489 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 SLCO2B1O94956 709 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 VAPBO95292 243 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 FGF3P11487 239 aaPredicted RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 OGNP20774 298 aaKnown RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 CCR7P32248 378 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 BOP1Q14137 746 aaKnown RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 DHX34Q14147 1143 aaKnown RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 MAP9Q49MG5 647 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 MSS51Q4VC12 460 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 AARS2Q5JTZ9 985 aaKnown RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 CES3Q6UWW8 571 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 LDB1Q86U70 411 aaPredicted RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 FBXO39Q8N4B4 442 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 SPATA4Q8NEY3 305 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 LKAAEAR1Q8TD35 194 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 LPGAT1Q92604 370 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.38□□□□□ -0.27
CD9-208ENST00000538834 CXorf40BQ96DE9 158 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 WDR83Q9BRX9 315 aaKnown RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 VPS37BQ9H9H4 285 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 EPB41L5Q9HCM4 733 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 SIDT1Q9NXL6 827 aaKnown RBP13.38□□□□□ -0.27
CD9-208ENST00000538834 SLC24A2Q9UI40 661 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 RAXQ9Y2V3 346 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 PCDHGA3Q9Y5H0 932 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 AK5Q9Y6K8 562 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 CCDC88CQ9P219 2028 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 FAM208BQ5VWN6 2430 aa13.38□□□□□ -0.27
CD9-208ENST00000538834 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.37□□□□□ -0.27
CD9-208ENST00000538834 TTI1O43156 1089 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms