RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CPSF7Q8N684 471 aaKnown RBP13.87□□□□□ -0.19
ACTN1-205ENST00000538545 ELMO1Q92556 727 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 ATG10Q9H0Y0 220 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 SLC6A17Q9H1V8 727 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 C1orf21Q9H246 121 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 CDH7Q9ULB5 785 aa13.87□□□□□ -0.19
ACTN1-205ENST00000538545 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 STX16O14662 325 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 CHUKO15111 745 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 TSPAN6O43657 245 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 MAGEC1O60732 1142 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 SRPRAP08240 638 aaKnown RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 THRAP10827 490 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 CD9P21926 228 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 CCDC6Q16204 474 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 GPRIN3Q6ZVF9 776 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 TECPR1Q7Z6L1 1165 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 SUGP1Q8IWZ8 645 aaKnown RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 AFAP1L2Q8N4X5 818 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RASGEF1AQ8N9B8 481 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 ACTRT2Q8TDY3 377 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RHBDF1Q96CC6 855 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 DCUN1D1Q96GG9 259 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 PDE10AQ9Y233 779 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 PCYT1BQ9Y5K3 369 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RAD51BO15315 384 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 ESRRBO95718 433 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 FGF4P08620 206 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 AOAHP28039 575 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 SOX11P35716 441 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RPIAP49247 311 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 ABRQ12979 859 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 ZNF557Q8N988 423 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 METTL6Q8TCB7 284 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 MRPL38Q96DV4 380 aaKnown RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 PDLIM5Q96HC4 596 aaKnown RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RTKNQ9BST9 563 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 ARL15Q9NXU5 204 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 NUDT4Q9NZJ9 180 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 PPM1HQ9ULR3 514 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 CROCCQ5TZA2 2017 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 PLXNA2O75051 1894 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 IGLV3-16A0A075B6K0 115 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 SOBPA7XYQ1 873 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 KAT7O95251 611 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 OR56A5P0C7T3 313 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 CCND1P24385 295 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 PDHA2P29803 388 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RAP1GDS1P52306 607 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 THOP1P52888 689 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 VPS26BQ4G0F5 336 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 WASHC2DQ5SRD0 308 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 ANKRD54Q6NXT1 300 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 IL27RAQ6UWB1 636 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 UBE2R2Q712K3 238 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RNF175Q8N4F7 328 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 OR56A4Q8NGH8 313 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RP9Q8TA86 221 aaKnown RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 NRTNQ99748 197 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 P2RY13Q9BPV8 354 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 TMEM245Q9H330 911 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 SERGEFQ9UGK8 458 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 PTBP2Q9UKA9 531 aaKnown RBP13.86□□□□□ -0.19
ACTN1-205ENST00000538545 RNF11Q9Y3C5 154 aa13.86□□□□□ -0.19
ACTN1-205ENST00000538545 EIF4E1BA6NMX2 242 aaKnown RBP13.85□□□□□ -0.19
ACTN1-205ENST00000538545 NR5A2O00482 541 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 PSMG1O95456 288 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 SOD1P00441 154 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 RPSAP08865 295 aaKnown RBP13.85□□□□□ -0.19
ACTN1-205ENST00000538545 ZNF30P17039 623 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 MSH3P20585 1137 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 ABRAXAS2Q15018 415 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 MMEL1Q495T6 779 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 DPPA4Q7L190 304 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 KYQ8NBH2 561 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 NRG4Q8WWG1 115 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 KLK6Q92876 244 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 FAR2Q96K12 515 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 KCTD5Q9NXV2 234 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 GDE1Q9NZC3 331 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 POMPQ9Y244 141 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 OARD1Q9Y530 152 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 GIPC1O14908 333 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 ASLP04424 464 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 C6P13671 934 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 VCLP18206 1134 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 ITPKAP23677 461 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 PLIN5Q00G26 463 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 HMGCS1Q01581 520 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 SATB1Q01826 763 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 TRAF3Q13114 568 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 ART3Q13508 389 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 LYPLAL1Q5VWZ2 237 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 Q6ZSR9 355 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 RETREG3Q86VR2 466 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 PLPP6Q8IY26 295 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 YAF2Q8IY57 180 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 CHPFQ8IZ52 775 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms