RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 ZDHHC20Q5W0Z9 365 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 LCN8Q6JVE9 175 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 DPY19L3Q6ZPD9 716 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 ADGRG2Q8IZP9 1017 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 TMEM79Q9BSE2 394 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 EMILIN2Q9BXX0 1053 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 FAM192AQ9GZU8 254 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CCM2LQ9NUG4 571 aaPredicted RBP11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 ACTR3BQ9P1U1 418 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 SUN2Q9UH99 717 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 CCL27Q9Y4X3 112 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 AP4B1Q9Y6B7 739 aa11.23□□□□□ -0.61
SLC28A1-204ENST00000538177 DOCK6Q96HP0 2047 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 ZNF839A8K0R7 811 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 EIF3FO00303 357 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 KIF1CO43896 1103 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 FGF19O95750 216 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 GUCA1CO95843 209 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 PABPC1P11940 636 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 ARL1P40616 181 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 GJA8P48165 433 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 ERVFC1P60507 584 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 B4GALNT1Q00973 533 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 SEMG2Q02383 582 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 PRKG2Q13237 762 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 ABRAXAS2Q15018 415 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 ATP13A5Q4VNC0 1218 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 CDKL4Q5MAI5 379 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 RNF220Q5VTB9 566 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 FOXB2Q5VYV0 432 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 ZFAND4Q86XD8 727 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 PLPP6Q8IY26 295 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 ST13P4Q8IZP2 240 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 DPP10Q8N608 796 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 CANT1Q8WVQ1 401 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 EME1Q96AY2 570 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 ULK4Q96C45 1275 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 TCEAL4Q96EI5 215 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 TRAPPC9Q96Q05 1148 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 COPS8Q99627 209 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 EGFL8Q99944 293 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 NTMT1Q9BV86 223 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 APOL5Q9BWW9 433 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 MUC13Q9H3R2 512 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 BRD9Q9H8M2 597 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 IL23AQ9NPF7 189 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 OPTCQ9UBM4 332 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 SLCO3A1Q9UIG8 710 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 CNOT6Q9ULM6 557 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 PTPRSQ13332 1948 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 PIKFYVEQ9Y2I7 2098 aa11.22□□□□□ -0.61
SLC28A1-204ENST00000538177 C15orf38-AP3S2A0A0A6YYH1 394 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 WASH3PC4AMC7 463 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 K7EPI3 171 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 ANKRD28O15084 1053 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 BNIP3LO60238 219 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 KATNA1O75449 491 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 BMP2P12643 396 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 HMOX2P30519 316 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 SPINT3P49223 89 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 EEFSECP57772 596 aaKnown RBP11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 CDKL1Q00532 357 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 DMC1Q14565 340 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 SMU1Q2TAY7 513 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 AP5B1Q2VPB7 878 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 HMBOX1Q6NT76 420 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 TTC23LQ6PF05 361 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 CYP20A1Q6UW02 462 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 RFLNAQ6ZTI6 216 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 ARPINQ7Z6K5 226 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 PTRH1Q86Y79 214 aaKnown RBP11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 HOMEZQ8IX15 550 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 GALNT4Q8N4A0 578 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 MRPL43Q8N983 215 aaKnown RBP11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 ZNF557Q8N988 423 aaPredicted RBP11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 IRF7Q92985 503 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 ZNF597Q96LX8 424 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 PPP3R2Q96LZ3 170 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 TCF25Q9BQ70 676 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 ACTL8Q9H568 366 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 ZDHHC6Q9H6R6 413 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 COQ10BQ9H8M1 238 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 TLR9Q9NR96 1032 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 UBAP1Q9NZ09 502 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 WWOXQ9NZC7 414 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 SNX13Q9Y5W8 968 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 MYOFQ9NZM1 2061 aa11.21□□□□□ -0.61
SLC28A1-204ENST00000538177 HIDE1A8MVS5 230 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 ARNTLO00327 626 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 IFRD1O00458 451 aaPredicted RBP11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 MAP3K13O43283 966 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 WDR47O94967 919 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 CSPG5O95196 566 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 UGT2B4P06133 528 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 C1SP09871 688 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 G6PDP11413 515 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 GDF5P43026 501 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 GSK3BP49841 420 aa11.21□□□□□ -0.62
SLC28A1-204ENST00000538177 GBX1Q14549 363 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms