RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 RNF135Q8IUD6 432 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 SCUBE3Q8IX30 993 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TIGD4Q8IY51 512 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 C9orf62Q8N4C0 152 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 OR4D10Q8NGI6 311 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 FBLIM1Q8WUP2 373 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 IPCEF1Q8WWN9 437 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 DDX17Q92841 729 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 ATOH1Q92858 354 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 FOXJ1Q92949 421 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 LENG9Q96B70 501 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 LRRC58Q96CX6 371 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 MOCOSQ96EN8 888 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 NECTIN4Q96NY8 510 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 QKIQ96PU8 341 aaKnown RBP eCLIP8.42□□□□□ -1.062e-9■■■■■ 52.7
SRGAP1-202ENST00000537556 APOL5Q9BWW9 433 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 BBS2Q9BXC9 721 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF518BQ9C0D4 1074 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 RACGAP1Q9H0H5 632 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TRIM45Q9H8W5 580 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 C3orf14Q9HBI5 128 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 ASAH2Q9NR71 780 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 CATSPERZQ9NTU4 200 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 MAP10Q9P2G4 905 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 RGS17Q9UGC6 210 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 ING4Q9UNL4 249 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 A0A0J9YYE9 177 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 FAM92AA1XBS5 289 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 KRBOX1C9JBD0 128 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 BCKDKO14874 412 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 KHNYNO15037 678 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 FOSP01100 380 aaPredicted RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 MTHFRP42898 656 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 NOVP48745 357 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 GSK3BP49841 420 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CHRNB3Q05901 458 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 GRAPQ13588 217 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CAMK1Q14012 370 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 DUSP6Q16828 381 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 HKDC1Q2TB90 917 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 FSTL4Q6MZW2 842 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 RIMKLAQ8IXN7 391 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CNIH3Q8TBE1 160 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 UTP15Q8TED0 518 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CRYGNQ8WXF5 182 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 COPS5Q92905 334 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CDCA5Q96FF9 252 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 LHX5Q9H2C1 402 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 EML4Q9HC35 981 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 MRM3Q9HC36 420 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 UBQLN2Q9UHD9 624 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CDH9Q9ULB4 789 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 GINS2Q9Y248 185 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 KCPQ6ZWJ8 1503 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 A0A075B6Q4 140 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 NT5C1B-RDH14C9J2C7 533 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 DFFAO00273 331 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 NR5A2O00482 541 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 APOL3O95236 402 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CELF2O95319 508 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CYBBP04839 570 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 PGRP06401 933 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 SNHG28P0DPA3 235 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CD72P21854 359 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CHRNA5P30532 468 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 MEOX2P50222 304 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 GPR19Q15760 415 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 SYT16Q17RD7 645 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 COQ5Q5HYK3 327 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 ZC3H12BQ5HYM0 836 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 GPR139Q6DWJ6 353 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 SULT1C3Q6IMI6 304 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CNSTQ6PJW8 725 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 STRA8Q7Z7C7 330 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CLRN3Q8NCR9 226 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 OR9I1Q8NGQ6 314 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF606Q8WXB4 792 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 ELMO3Q96BJ8 720 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 CERS2Q96G23 380 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 MFSD14AQ96MC6 490 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 C8orf37Q96NL8 207 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 SMURF2Q9HAU4 748 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 MAP3K20Q9NYL2 800 aaKnown RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 MORF4L1Q9UBU8 362 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 TINAGQ9UJW2 476 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 LIPT1Q9Y234 373 aa8.41□□□□□ -1.06
SRGAP1-202ENST00000537556 MROH6A6NGR9 719 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 TMEM233B4DJY2 109 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 GNGT2O14610 69 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 RAF1P04049 648 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 SERPINF2P08697 491 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 CHMP24386 653 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 GADD45AP24522 165 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 TNFSF8P32971 234 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 KCNC1P48547 511 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 GLUD2P49448 558 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 CDH13P55290 713 aa8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 EEFSECP57772 596 aaKnown RBP8.4□□□□□ -1.06
SRGAP1-202ENST00000537556 GTF2BQ00403 316 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms