RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PTRHD1Q6GMV3 140 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 LEMD2Q8NC56 503 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 PDZD8Q8NEN9 1154 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 GFM2Q969S9 779 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 TMBIM1Q969X1 311 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 ZIC5Q96T25 663 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 OSBPL6Q9BZF3 934 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 CIPCQ9C0C6 399 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 NSUN3Q9H649 340 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 TLR9Q9NR96 1032 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 LHX3Q9UBR4 397 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 PCDHB1Q9Y5F3 818 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 PCDHGA11Q9Y5H2 935 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 H0YAE9 185 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 TMX2-CTNND1H3BSU7 103 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 DEAF1O75398 565 aaPredicted RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 GALTP07902 379 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 ALPIP09923 528 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 RAP2AP10114 183 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 SLC2A4P14672 509 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 GGT1P19440 569 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 JAK1P23458 1154 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 MZF1P28698 734 aaPredicted RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 TTKP33981 857 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 RPL38P63173 70 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 SREBF2Q12772 1141 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 ELAVL2Q12926 359 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 FAM98BQ52LJ0 330 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 PDPRQ8NCN5 879 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 ZNF583Q96ND8 569 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 MUS81Q96NY9 551 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 C17orf80Q9BSJ5 609 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 YTHDF1Q9BYJ9 559 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 ELAC1Q9H777 363 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 VAPAQ9P0L0 249 aa14.09□□□□□ -0.15
USP44-203ENST00000537435 FAF1Q9UNN5 650 aaPredicted RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 FCF1Q9Y324 198 aaKnown RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 MAGED1Q9Y5V3 778 aaPredicted RBP14.09□□□□□ -0.15
USP44-203ENST00000537435 H3BMQ9 156 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 IFRD1O00458 451 aaPredicted RBP14.08□□□□□ -0.15
USP44-203ENST00000537435 FZD6O60353 706 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 DFNA5O60443 496 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 PFDN1O60925 122 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 KCNH1O95259 989 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 HMGCLP35914 325 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 PIK3CGP48736 1102 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 ENTPD1P49961 510 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 HLCSP50747 726 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 ALDH3A2P51648 485 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 RHOAP61586 193 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 CHRNB3Q05901 458 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 DAG1Q14118 895 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 KIAA0040Q15053 153 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 NEDD8Q15843 81 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 ATXN7L2Q5T6C5 722 aaPredicted RBP14.08□□□□□ -0.15
USP44-203ENST00000537435 FAM151BQ6UXP7 276 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 TMEM26Q6ZUK4 368 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 CLEC4FQ8N1N0 589 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 DBF4BQ8NFT6 615 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 OR8J3Q8NGG0 315 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 ZNF420Q8TAQ5 688 aaPredicted RBP14.08□□□□□ -0.15
USP44-203ENST00000537435 LKAAEAR1Q8TD35 194 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 BCL7CQ8WUZ0 217 aaPredicted RBP14.08□□□□□ -0.15
USP44-203ENST00000537435 PPP3R2Q96LZ3 170 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 COG8Q96MW5 612 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 BOCQ9BWV1 1114 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 CLPBQ9H078 707 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 RNF38Q9H0F5 515 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 ELOVL2Q9NXB9 296 aa14.08□□□□□ -0.15
USP44-203ENST00000537435 IFT80Q9P2H3 777 aaPredicted RBP14.08□□□□□ -0.15
USP44-203ENST00000537435 GOLGA8CPA6NN73 597 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 SCAMP3O14828 347 aaKnown RBP14.08□□□□□ -0.16
USP44-203ENST00000537435 TAPBPO15533 448 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 TCF3P15923 654 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 DCKP27707 260 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 ELK4P28324 431 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 CA5AP35218 305 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 PTGR1Q14914 329 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 CERS6Q6ZMG9 384 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 ITIH5Q86UX2 942 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 SERPINA9Q86WD7 417 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 CARNMT1Q8N4J0 409 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 SLC13A3Q8WWT9 602 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 FIG4Q92562 907 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 CCL27Q9Y4X3 112 aa14.08□□□□□ -0.16
USP44-203ENST00000537435 H0Y626 953 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 FFAR3O14843 346 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 GPR42O15529 346 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 GMNNO75496 209 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 PRSS23O95084 383 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 ZNF7P17097 686 aaPredicted RBP14.07□□□□□ -0.16
USP44-203ENST00000537435 SHMT2P34897 504 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 MTHFRP42898 656 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 GDF5P43026 501 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 TUFMP49411 452 aaKnown RBP14.07□□□□□ -0.16
USP44-203ENST00000537435 KLHL35Q6PF15 583 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 LRRC8DQ7L1W4 858 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 STK32CQ86UX6 486 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 FAM86B1Q8N7N1 296 aa14.07□□□□□ -0.16
USP44-203ENST00000537435 OR2T12Q8NG77 320 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms